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TitleStructure of a low-population binding intermediate in protein-RNA recognition.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 113, Page 7171-7176, Year 2016
Publish dateMar 28, 2016 (structure data deposition date)
AuthorsBorkar, A.N. / Bardaro, M.F. / Camilloni, C. / Aprile, F.A. / Varani, G. / Vendruscolo, M.
External linksProc. Natl. Acad. Sci. USA / PubMed:27286828
MethodsNMR (solution)
Structure data

PDB-5j0m:
Ground state sampled during RDC restrained Replica-averaged Metadynamics (RAM) simulations of the HIV-1 TAR complexed with cyclic peptide mimetic of Tat
Method: SOLUTION NMR

PDB-5j1o:
Excited state (Bound-like) sampled during RDC restrained Replica-averaged Metadynamics (RAM) simulations of the HIV-1 TAR complexed with cyclic peptide mimetic of Tat
Method: SOLUTION NMR

PDB-5j2w:
Intermediate state lying on the pathway of release of Tat from HIV-1 TAR.
Method: SOLUTION NMR

Source
  • human immunodeficiency virus 1
KeywordsVIRAL PROTEIN / TAR:Tat complex / RAM simulations / Residual dipolar couplings / ground state / excited state / intermediate excited state

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