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Structure paper

TitleDivergent non-heme iron enzymes in the nogalamycin biosynthetic pathway.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 113, Page 5251-5256, Year 2016
Publish dateNov 11, 2015 (structure data deposition date)
AuthorsSiitonen, V. / Selvaraj, B. / Niiranen, L. / Lindqvist, Y. / Schneider, G. / Metsa-Ketela, M.
External linksProc. Natl. Acad. Sci. USA / PubMed:27114534
MethodsX-ray diffraction
Resolution2.13 - 2.85 Å
Structure data

PDB-5ep9:
Crystal structure of the non-heme alpha ketoglutarate dependent epimerase SnoN from nogalamycin biosynthesis
Method: X-RAY DIFFRACTION / Resolution: 2.13 Å

PDB-5epa:
Crystal structure of non-heme alpha ketoglutarate dependent carbocyclase SnoK from nogalamycin biosynthesis
Method: X-RAY DIFFRACTION / Resolution: 2.24 Å

PDB-5equ:
Crystal structure of the epimerase SnoN in complex with Fe3+, alpha ketoglutarate and nogalamycin RO
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-5erl:
Crystal structure of the epimerase SnoN in complex with Ni2+, succinate and nogalamycin RO
Method: X-RAY DIFFRACTION / Resolution: 2.85 Å

Chemicals

ChemComp-AKG:
2-OXOGLUTARIC ACID

ChemComp-FE:
Unknown entry

ChemComp-ACT:
ACETATE ION

ChemComp-HOH:
WATER

ChemComp-MG:
Unknown entry

ChemComp-5R6:
Nogalamycin RO

ChemComp-NI:
NICKEL (II) ION

ChemComp-SIN:
SUCCINIC ACID

Source
  • streptomyces nogalater (bacteria)
KeywordsMETAL BINDING PROTEIN / polyketide biosynthesis / iron center / LYASE / non-heme iron center / ISOMERASE / none-heme iron / substrate complex / nogalamycin biosynthesis / alpha ketoglutarate dependent epimerase

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