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Structure paper

TitleStructural characterization of human heparanase reveals insights into substrate recognition.
Journal, issue, pagesNat. Struct. Mol. Biol., Vol. 22, Page 1016-1022, Year 2015
Publish dateOct 14, 2015 (structure data deposition date)
AuthorsWu, L. / Viola, C.M. / Brzozowski, A.M. / Davies, G.J.
External linksNat. Struct. Mol. Biol. / PubMed:26575439
MethodsX-ray diffraction
Resolution1.63 - 1.88 Å
Structure data

PDB-5e8m:
Crystal structure of human heparanase
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-5e97:
Glycoside Hydrolase ligand structure 1
Method: X-RAY DIFFRACTION / Resolution: 1.63 Å

PDB-5e98:
Crystal structure of human heparanase in complex with HepMer M04S02a
Method: X-RAY DIFFRACTION / Resolution: 1.63 Å

PDB-5e9b:
Crystal structure of human heparanase in complex with HepMer M09S05a
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

PDB-5e9c:
Crystal structure of human heparanase in complex with heparin tetrasaccharide dp4
Method: X-RAY DIFFRACTION / Resolution: 1.73 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-CL:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-NPO:
P-NITROPHENOL

ChemComp-IMD:
IMIDAZOLE

ChemComp-SO4:
SULFATE ION

Source
  • homo sapiens (human)
KeywordsHYDROLASE / glycoside hydrolase / apo / protein / sugar / ligand 1 / heparan / ligand 3 / ligand 4

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