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Structure paper

TitleThe catalytic mechanism and unique low pH optimum of Caldicellulosiruptor bescii family 3 pectate lyase.
Journal, issue, pagesActa Crystallogr. ,Sect. D, Vol. 71, Page 1946-1954, Year 2015
Publish dateMar 24, 2015 (structure data deposition date)
AuthorsAlahuhta, M. / Taylor, L.E. / Brunecky, R. / Sammond, D.W. / Michener, W. / Adams, M.W. / Himmel, M.E. / Bomble, Y.J. / Lunin, V.
External linksActa Crystallogr. ,Sect. D / PubMed:26327384
MethodsX-ray diffraction
Resolution1.15 - 1.55 Å
Structure data

PDB-4yz0:
C. bescii Family 3 pectate lyase double mutant K108A/E39Q in complex with trigalacturonic acid
Method: X-RAY DIFFRACTION / Resolution: 1.15 Å

PDB-4yza:
C. bescii Family 3 pectate lyase double mutant K108A/Q111A in complex with trigalacturonic acid
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

PDB-4yzq:
C. bescii Family 3 pectate lyase double mutant K108A/Q111N in complex with trigalacturonic acid
Method: X-RAY DIFFRACTION / Resolution: 1.48 Å

PDB-4yzx:
C. bescii Family 3 pectate lyase double mutant K108A/D107N in complex with trigalacturonic acid
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

PDB-4z03:
C. bescii Family 3 pectate lyase double mutant K108A in complex with trigalacturonic acid
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-4z05:
C. bescii Family 3 pectate lyase mutant E84A
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4z06:
C. bescii Family 3 pectate lyase double mutant K108A/R133A in complex with ALPHA-D-GALACTOPYRANURONIC ACID
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-IMD:
IMIDAZOLE

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-MRD:
(4R)-2-METHYLPENTANE-2,4-DIOL / precipitant*YM

ChemComp-GTR:
beta-D-galactopyranuronic acid

ChemComp-ADA:
alpha-D-galactopyranuronic acid

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

Source
  • caldicellulosiruptor bescii (strain atcc baa-1888 / dsm 6725 / z-1320) (bacteria)
KeywordsLYASE / PL3 / PARALLEL BETA-HELIX

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