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Structure paper

TitleNucleotide binding interactions modulate dNTP selectivity and facilitate 8-oxo-dGTP incorporation by DNA polymerase lambda.
Journal, issue, pagesNucleic Acids Res., Vol. 43, Page 8089-8099, Year 2015
Publish dateDec 5, 2014 (structure data deposition date)
AuthorsBurak, M.J. / Guja, K.E. / Garcia-Diaz, M.
External linksNucleic Acids Res. / PubMed:26220180
MethodsX-ray diffraction
Resolution1.9 - 2.4 Å
Structure data

PDB-4x5v:
Crystal structure of the post-catalytic nick complex of DNA polymerase lambda with a templating A and incorporated 8-oxo-dGMP
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-4xa5:
Crystal structure of the pre-catalytic ternary complex of DNA polymerase lambda with a templating A and an incoming 8-oxo-dGTP
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4xus:
Crystal structure of the pre-catalytic ternary complex of DNA polymerase lambda with a templating A and an incoming dTTP
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-MG:
Unknown entry

ChemComp-CIT:
CITRIC ACID

ChemComp-HOH:
WATER

ChemComp-8DG:
8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE

ChemComp-ACT:
ACETATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-TTP:
THYMIDINE-5'-TRIPHOSPHATE

ChemComp-DOC:
2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE

Source
  • homo sapiens (human)
  • synthetic construct (others)
KeywordsTRANSFERASE/DNA / DNA POLYMERASE LAMBDA / PROTEIN-DNA COMPLEX / HELIX-HAIRPIN-HELIX / TRANSFERASE-DNA COMPLEX

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