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TitleStructural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Journal, issue, pagesSci Rep, Vol. 5, Page 11151-11151, Year 2015
Publish dateFeb 5, 2015 (structure data deposition date)
AuthorsSakamoto, Y. / Suzuki, Y. / Iizuka, I. / Tateoka, C. / Roppongi, S. / Fujimoto, M. / Inaka, K. / Tanaka, H. / Yamada, M. / Ohta, K. ...Sakamoto, Y. / Suzuki, Y. / Iizuka, I. / Tateoka, C. / Roppongi, S. / Fujimoto, M. / Inaka, K. / Tanaka, H. / Yamada, M. / Ohta, K. / Gouda, H. / Nonaka, T. / Ogasawara, W. / Tanaka, N.
External linksSci Rep / PubMed:26057589
MethodsX-ray diffraction
Resolution1.66 - 2.7 Å
Structure data

PDB-4xzy:
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-4y01:
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
Method: X-RAY DIFFRACTION / Resolution: 2.46 Å

PDB-4y02:
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis (Ground)
Method: X-RAY DIFFRACTION / Resolution: 1.96 Å

PDB-4y04:
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis (Space)
Method: X-RAY DIFFRACTION / Resolution: 1.66 Å

PDB-4y06:
Crystal structure of the DAP BII (G675R) dipeptide complex
Method: X-RAY DIFFRACTION / Resolution: 2.18 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-K:
Unknown entry

ChemComp-LEU:
LEUCINE

ChemComp-GLU:
GLUTAMIC ACID

ChemComp-ZN:
Unknown entry

Source
  • porphyromonas gingivalis (bacteria)
  • pseudoxanthomonas mexicana (bacteria)
KeywordsHYDROLASE / wild type / WT / Ground / Space

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