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Structure paper

TitleEngineering a Nickase on the Homing Endonuclease I-Dmoi Scaffold.
Journal, issue, pagesJ. Biol. Chem., Vol. 290, Page 18534-, Year 2015
Publish dateMar 2, 2015 (structure data deposition date)
AuthorsMolina, R. / Marcaida, M.J. / Redondo, P. / Marenchino, M. / Duchateau, P. / D'Abramo, M. / Montoya, G. / Prieto, J.
External linksJ. Biol. Chem. / PubMed:26045557
MethodsX-ray diffraction
Resolution2.4 - 2.75 Å
Structure data

PDB-5ak9:
THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MN
Method: X-RAY DIFFRACTION / Resolution: 2.601 Å

PDB-5akf:
THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA NICKED IN THE CODING STRAND A AND IN THE PRESENCE OF 2MM MN
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-5akm:
THE CRYSTAL STRUCTURE OF I-DMOI G20S IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MG
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-5akn:
THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA NICKED IN THE non-CODING STRAND B AND IN THE PRESENCE OF 2MM MN
Method: X-RAY DIFFRACTION / Resolution: 2.75 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-ACT:
ACETATE ION

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-MG:
Unknown entry

Source
  • desulfurococcus mobilis (archaea)
  • synthetic construct (others)
KeywordsHYDROLASE / GENE TARGETING / GENETICS / PROTEIN-DNA INTERACTION / HOMING ENDONUCLEASES / X-RAY CRYSTALLOGRAPHY. / HYDROLASE/DNA / HYDROLASE-DNA COMPLEX

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