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TitleCrystal Structure and Product Analysis of an Archaeal myo-Inositol Kinase Reveal Substrate Recognition Mode and 3-OH Phosphorylation
Journal, issue, pagesBiochemistry, Vol. 54, Page 3494-3503, Year 2015
Publish dateDec 26, 2014 (structure data deposition date)
AuthorsNagata, R. / Fujihashi, M. / Sato, T. / Atomi, H. / Miki, K.
External linksBiochemistry / PubMed:25972008
MethodsX-ray diffraction
Resolution1.93 - 2.08 Å
Structure data

PDB-4xf6:
myo-inositol 3-kinase bound with its products (ADP and 1D-myo-inositol 3-phosphate)
Method: X-RAY DIFFRACTION / Resolution: 2.08 Å

PDB-4xf7:
myo-inositol 3-kinase bound with its substrates (AMPPCP and myo-inositol)
Method: X-RAY DIFFRACTION / Resolution: 1.93 Å

Chemicals

ChemComp-LIP:
L-MYO-INOSITOL-1-PHOSPHATE

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-INS:
1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE

ChemComp-MG:
Unknown entry

ChemComp-IOD:
IODIDE ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-ACP:
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER / AMP-PCP, energy-carrying molecule analogue*YM

Source
  • thermococcus kodakaraensis kod1 (archaea)
KeywordsTRANSFERASE / ribokinase / product complex / substrate complex

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