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Structure paper

TitleA variable DNA recognition site organization establishes the LiaR-mediated cell envelope stress response of enterococci to daptomycin.
Journal, issue, pagesNucleic Acids Res., Vol. 43, Page 4758-4773, Year 2015
Publish dateOct 29, 2014 (structure data deposition date)
AuthorsDavlieva, M. / Shi, Y. / Leonard, P.G. / Johnson, T.A. / Zianni, M.R. / Arias, C.A. / Ladbury, J.E. / Shamoo, Y.
External linksNucleic Acids Res. / PubMed:25897118
MethodsX-ray diffraction
Resolution1.769 - 2.4 Å
Structure data

PDB-4wsz:
Crystal structure of the DNA binding domains of wild type LiaR from E. faecalis
Method: X-RAY DIFFRACTION / Resolution: 1.769 Å

PDB-4wt0:
Crystal structure of the DNA binding domains of LiaRD191N from E. faecalis
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4wu4:
Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 22bp DNA
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4wuh:
Crystal structure of E. faecalis DNA binding domain LiaR wild type complexed with 22bp DNA
Method: X-RAY DIFFRACTION / Resolution: 2.294 Å

PDB-4wul:
Crystal structure of E. faecalis DNA binding domain LiaRD191N complexed with 26bp DNA
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-PR:
PRASEODYMIUM ION

ChemComp-GOL:
GLYCEROL

ChemComp-ACT:
ACETATE ION

ChemComp-HOH:
WATER

Source
  • enterococcus faecalis s613 (bacteria)
KeywordsDNA BINDING PROTEIN / helix-turn-helix / response regulator / enterococci / DNA binding domain / daptomycin resistant mutation / DNA BINDING PROTEIN/DNA / DNA BINDING PROTEIN-DNA complex

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