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Structure paper

TitleProtein-RNA affinity of ribosomal protein L1 mutants does not correlate with the number of intermolecular interactions.
Journal, issue, pagesActa Crystallogr. ,Sect. D, Vol. 71, Page 376-386, Year 2015
Publish dateMay 22, 2014 (structure data deposition date)
AuthorsTishchenko, S. / Kostareva, O. / Gabdulkhakov, A. / Mikhaylina, A. / Nikonova, E. / Nevskaya, N. / Sarskikh, A. / Piendl, W. / Garber, M. / Nikonov, S.
External linksActa Crystallogr. ,Sect. D / PubMed:25664749
MethodsX-ray diffraction
Resolution1.35 - 2.6 Å
Structure data

PDB-4qg3:
Crystal structure of mutant ribosomal protein G219V TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-4qgb:
Crystal structure of mutant ribosomal protein G219V TthL1
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-4qvi:
Crystal structure of mutant ribosomal protein M218L TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4reo:
Mutant ribosomal protein l1 from thermus thermophilus with threonine 217 replaced by valine
Method: X-RAY DIFFRACTION / Resolution: 1.35 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-IPA:
ISOPROPYL ALCOHOL / alkaloid*YM

ChemComp-BME:
BETA-MERCAPTOETHANOL

ChemComp-URE:
UREA

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-ACT:
ACETATE ION

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-GLY:
GLYCINE

Source
  • thermus thermophilus (bacteria)
KeywordsRIBOSOMAL PROTEIN/RNA / Rossmann Fold / RIBOSOMAL PROTEIN / rRNA / rRNA BINDING / RIBOSOME / RIBOSOMAL PROTEIN-RNA complex / L1 protuberance / RNA BINDING PROTEIN

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