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Structure paper

TitleStructural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Journal, issue, pagesNucleic Acids Res., Vol. 43, Page 1283-1296, Year 2015
Publish dateJul 14, 2014 (structure data deposition date)
AuthorsFillenberg, S.B. / Grau, F.C. / Seidel, G. / Muller, Y.A.
External linksNucleic Acids Res. / PubMed:25564531
MethodsX-ray diffraction
Resolution1.91 - 2.903 Å
Structure data

PDB-4u0v:
Crystal structure of YvoA from Bacillus subtilis in complex with glucosamine-6-phosphate
Method: X-RAY DIFFRACTION / Resolution: 2.051 Å

PDB-4u0w:
Crystal structure of YvoA from Bacillus subtilis in complex with N-acetylglucosamine-6-phosphate
Method: X-RAY DIFFRACTION / Resolution: 2.001 Å

PDB-4u0y:
Crystal structure of the DNA-binding domains of YvoA in complex with palindromic operator DNA
Method: X-RAY DIFFRACTION / Resolution: 1.91 Å

PDB-4wwc:
Crystal structure of full length YvoA in complex with palindromic operator DNA
Method: X-RAY DIFFRACTION / Resolution: 2.903 Å

Chemicals

ChemComp-GLP:
2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-16G:
2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose

ChemComp-GOL:
GLYCEROL

ChemComp-CL:
Unknown entry

Source
  • bacillus subtilis subsp. subtilis str. 168 (bacteria)
  • bacillus subtilis (bacteria)
KeywordsTRANSCRIPTION / Repressor / Bacterial transcription regulation / Transcription factor / GntR/HutC family / Chorismate lyase fold / N-acetylglucosamine utilization / Winged helix-turn-helix motif / DNA-binding / Operator-binding

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