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Structure paper

Title"Turn-on" protein fluorescence: in situ formation of cyanine dyes.
Journal, issue, pagesJ. Am. Chem. Soc., Vol. 137, Page 1073-1080, Year 2015
Publish dateNov 30, 2008 (structure data deposition date)
AuthorsYapici, I. / Lee, K.S. / Berbasova, T. / Nosrati, M. / Jia, X. / Vasileiou, C. / Wang, W. / Santos, E.M. / Geiger, J.H. / Borhan, B.
External linksJ. Am. Chem. Soc. / PubMed:25534273
MethodsX-ray diffraction
Resolution1.471 - 2.6 Å
Structure data

PDB-3fep:
Crystal structure of the R132K:R111L:L121E:R59W-CRABPII mutant complexed with a synthetic ligand (merocyanin) at 2.60 angstrom resolution.
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-4qgv:
Crystal structure of the R132K:R111L mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.73 angstrom resolution.
Method: X-RAY DIFFRACTION / Resolution: 1.73 Å

PDB-4qgw:
Crystal sturcture of the R132K:R111L:L121D mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.77 angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.77 Å

PDB-4qgx:
Crystal structure of the R132K:R111L:L121E mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.47 angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.471 Å

Chemicals

ChemComp-LMC:
(2E,4E,6E)-3-methyl-6-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)hexa-2,4-dienal

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

ChemComp-HOH:
WATER

ChemComp-B3P:
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

Source
  • homo sapiens (human)
KeywordsTRANSPORT PROTEIN / merocyanin / CRABPII / retinoic acid / retinoid / PSB / protonated Schiff base / fluorescence / CRABP / Nucleus / Retinol-binding / Transport / Vitamin A / PROTEIN BINDING / Protein Engineering / Protein Fluorescence Merocyanine dyes for fluorescent protein labeling / Fluorescent protein tag / Merocyanine Protonated Schiff Base / Iminium / Protein Fluorescence / Merocyanine dyes for fluorescent protein labeling / Merocyanine Protonated Schiff Base Iminium

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