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TitleSwitching Demethylation Activities between AlkB Family RNA/DNA Demethylases through Exchange of Active-Site Residues.
Journal, issue, pagesAngew. Chem. Int. Ed. Engl., Vol. 53, Page 3659-3662, Year 2014
Publish dateNov 6, 2013 (structure data deposition date)
AuthorsZhu, C. / Yi, C.
External linksAngew. Chem. Int. Ed. Engl. / PubMed:24596302
MethodsX-ray diffraction
Resolution1.374 - 1.622 Å
Structure data

PDB-4nid:
Crystal structure of AlkB protein with cofactors bound to dsDNA containing m6A
Method: X-RAY DIFFRACTION / Resolution: 1.58 Å

PDB-4nig:
Crystal structure of AlkB D135I/E136H mutant protein with cofactors bound to dsDNA containing m6A/A
Method: X-RAY DIFFRACTION / Resolution: 1.52 Å

PDB-4nih:
Crystal structure of AlkB E136L mutant protein with cofactors bound to dsDNA containing m6A/A
Method: X-RAY DIFFRACTION / Resolution: 1.374 Å

PDB-4nii:
Crystal structure of AlkB D135I mutant protein with cofactors bound to dsDNA containing m6A/A
Method: X-RAY DIFFRACTION / Resolution: 1.622 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-AKG:
2-OXOGLUTARIC ACID

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

Source
  • escherichia coli (E. coli)
KeywordsOXIDOREDUCTASE/DNA / DNA/RNA direct repair / jelly-roll fold / DNA/RNA demethylation repair / Fe(II) / 2-KG / OXIDOREDUCTASE-DNA complex

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