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Structure paper

TitleTracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold.
Journal, issue, pagesPlos One, Vol. 9, Page e86050-e86050, Year 2014
Publish dateAug 14, 2012 (structure data deposition date)
AuthorsSteemson, J.D. / Baake, M. / Rakonjac, J. / Arcus, V.L. / Liddament, M.T.
External linksPlos One / PubMed:24465865
MethodsX-ray diffraction
Resolution1.86 - 2.75 Å
Structure data

PDB-4gla:
OBody NL8 bound to hen egg-white lysozyme
Method: X-RAY DIFFRACTION / Resolution: 2.75 Å

PDB-4glv:
OBody AM3L09 bound to hen egg-white lysozyme
Method: X-RAY DIFFRACTION / Resolution: 2.574 Å

PDB-4gn3:
OBody AM1L10 bound to hen egg-white lysozyme
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-4gn4:
OBody AM2EP06 bound to hen egg-white lysozyme
Method: X-RAY DIFFRACTION / Resolution: 1.861 Å

PDB-4gn5:
OBody AM3L15 bound to hen egg-white lysozyme
Method: X-RAY DIFFRACTION / Resolution: 1.86 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-PO4:
PHOSPHATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

ChemComp-SO4:
SULFATE ION

ChemComp-ACT:
ACETATE ION

Source
  • pyrobaculum aerophilum (archaea)
  • gallus gallus (chicken)
KeywordsHYDROLASE/DE NOVO PROTEIN / beta barrel / OB-fold / protein-protein complex / novel scaffold / muraminidase / enzyme inhibition / engineered binding protein / HYDROLASE-DE NOVO PROTEIN complex / inhibitor / DE NOVO PROTEIN/HYDROLASE / DE NOVO PROTEIN-HYDROLASE complex

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