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Structure paper

TitleCrystal structures of d-alanine-d-alanine ligase from Xanthomonas oryzae pv. oryzae alone and in complex with nucleotides
Journal, issue, pagesArch. Biochem. Biophys., Vol. 545C, Page 92-99, Year 2014
Publish dateJun 3, 2013 (structure data deposition date)
AuthorsDoan, T.T.N. / Kim, J.K. / Ngo, H.P.T. / Tran, H.T. / Cha, S.S. / Chung, K.M. / Huynh, K.H. / Ahn, Y.J. / Kang, L.W.
External linksArch. Biochem. Biophys. / PubMed:24440607
MethodsX-ray diffraction
Resolution2.1 - 2.3 Å
Structure data

PDB-4l1k:
Crystal structure of D-alanine-D-alnine ligase from Xanthomonas oryzae pv. oryzae with AMPPNP
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4me6:
Crystal structure of D-alanine-D-alanine ligase A from Xanthomonas oryzae pathovar oryzae with ADP
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-ANP:
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER / AMP-PNP, energy-carrying molecule analogue*YM

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

Source
  • xanthomonas oryzae pv. oryzae (bacteria)
KeywordsLIGASE / ADP-depending enzyme / d-alanine-d-alanine ligase / Nucleotide binding

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