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Structure paper

TitleThe linear ubiquitin-specific deubiquitinase gumby regulates angiogenesis.
Journal, issue, pagesNature, Vol. 498, Page 318-324, Year 2013
Publish dateMay 17, 2013 (structure data deposition date)
AuthorsRivkin, E. / Almeida, S.M. / Ceccarelli, D.F. / Juang, Y.C. / MacLean, T.A. / Srikumar, T. / Huang, H. / Dunham, W.H. / Fukumura, R. / Xie, G. ...Rivkin, E. / Almeida, S.M. / Ceccarelli, D.F. / Juang, Y.C. / MacLean, T.A. / Srikumar, T. / Huang, H. / Dunham, W.H. / Fukumura, R. / Xie, G. / Gondo, Y. / Raught, B. / Gingras, A.C. / Sicheri, F. / Cordes, S.P.
External linksNature / PubMed:23708998
MethodsX-ray diffraction
Resolution1.6 - 2.83 Å
Structure data

PDB-4ksj:
Crystal structure of the OTU domain of Gumby/Fam105B at 1.6 angstrom
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-4ksk:
Gumby/Fam105B in complex with ubiquitin
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-4ksl:
Gumby/Fam105B in complex with linear di-ubiquitin
Method: X-RAY DIFFRACTION / Resolution: 2.83 Å

Chemicals

ChemComp-BME:
BETA-MERCAPTOETHANOL

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

Source
  • homo sapiens (human)
KeywordsHYDROLASE / OTU domain / deubiquitinase / ubiquitin / HYDROLASE/protein binding / HYDROLASE-protein binding complex / linear diubiquitin

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