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Structure paper

TitleA strategy for modulation of enzymes in the ubiquitin system.
Journal, issue, pagesScience, Vol. 339, Page 590-595, Year 2013
Publish dateJun 30, 2009 (structure data deposition date)
AuthorsErnst, A. / Avvakumov, G. / Tong, J. / Fan, Y. / Zhao, Y. / Alberts, P. / Persaud, A. / Walker, J.R. / Neculai, A.M. / Neculai, D. ...Ernst, A. / Avvakumov, G. / Tong, J. / Fan, Y. / Zhao, Y. / Alberts, P. / Persaud, A. / Walker, J.R. / Neculai, A.M. / Neculai, D. / Vorobyov, A. / Garg, P. / Beatty, L. / Chan, P.K. / Juang, Y.C. / Landry, M.C. / Yeh, C. / Zeqiraj, E. / Karamboulas, K. / Allali-Hassani, A. / Vedadi, M. / Tyers, M. / Moffat, J. / Sicheri, F. / Pelletier, L. / Durocher, D. / Raught, B. / Rotin, D. / Yang, J. / Moran, M.F. / Dhe-Paganon, S. / Sidhu, S.S.
External linksScience / PubMed:23287719
MethodsX-ray diffraction
Resolution2.1 - 2.7 Å
Structure data

PDB-3i3t:
Crystal structure of covalent ubiquitin-USP21 complex
Method: X-RAY DIFFRACTION / Resolution: 2.59 Å

PDB-3mtn:
Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-3n3k:
The catalytic domain of USP8 in complex with a USP8 specific inhibitor
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-3v6e:
Crystal Structure of USP2 and a mutant form of Ubiquitin
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4i6l:
Crystal structure of OTUB1 in complex with ubiquitin variant
Method: X-RAY DIFFRACTION / Resolution: 2.488 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-NEH:
ETHANAMINE

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-GOL:
GLYCEROL

Source
  • homo sapiens (human)
KeywordsHYDROLASE / ubiquitin-specific protease activity / Ubiquitin biology / Structural Genomics Consortium / SGC / Activator / Chromatin regulator / Nucleus / Protease / Thiol protease / Transcription / Transcription regulation / Ubl conjugation pathway / Isopeptide bond / Phosphoprotein / INHIBITOR / DEUBIQUITINATING ENZYME / DUB / ZINC RIBBON / UBIQUITIN / Structural Genomics / hydrolase/signaling protein / hydrolase-signaling protein complex / deubiquitinase

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