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Structure paper

TitleStructural and Functional Analysis of JMJD2D Reveals Molecular Basis for Site-Specific Demethylation among JMJD2 Demethylases.
Journal, issue, pagesStructure, Vol. 21, Page 98-108, Year 2013
Publish dateOct 22, 2012 (structure data deposition date)
AuthorsKrishnan, S. / Trievel, R.C.
External linksStructure / PubMed:23219879
MethodsX-ray diffraction
Resolution1.799 - 2.495 Å
Structure data

PDB-4hon:
Crystal structure of human JMJD2D/KDM4D in complex with an H3K9me3 peptide and 2-oxoglutarate
Method: X-RAY DIFFRACTION / Resolution: 1.799 Å

PDB-4hoo:
Crystal structure of human JMJD2D/KDM4D apoenzyme
Method: X-RAY DIFFRACTION / Resolution: 2.495 Å

Chemicals

ChemComp-AKG:
2-OXOGLUTARIC ACID

ChemComp-NI:
NICKEL (II) ION

ChemComp-ZN:
Unknown entry

ChemComp-SCN:
THIOCYANATE ION

ChemComp-NO3:
NITRATE ION

ChemComp-PDO:
1,3-PROPANDIOL

ChemComp-HOH:
WATER

ChemComp-ACT:
ACETATE ION

Source
  • homo sapiens (human)
KeywordsOXIDOREDUCTASE / Jumonji C demethylase / JMJD2/KDM4 family / beta barrel fold

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