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TitleCryo-EM structure of a transcribing cypovirus.
Journal, issue, pagesProc Natl Acad Sci U S A, Vol. 109, Issue 16, Page 6118-6123, Year 2012
Publish dateApr 17, 2012
AuthorsChongwen Yang / Gang Ji / Hongrong Liu / Kai Zhang / Guangqiao Liu / Fei Sun / Ping Zhu / Lingpeng Cheng /
PubMed AbstractDouble-stranded RNA viruses in the family Reoviridae are capable of transcribing and capping nascent mRNA within an icosahedral viral capsid that remains intact throughout repeated transcription ...Double-stranded RNA viruses in the family Reoviridae are capable of transcribing and capping nascent mRNA within an icosahedral viral capsid that remains intact throughout repeated transcription cycles. However, how the highly coordinated mRNA transcription and capping process is facilitated by viral capsid proteins is still unknown. Cypovirus provides a good model system for studying the mRNA transcription and capping mechanism of viruses in the family Reoviridae. Here, we report a full backbone model of a transcribing cypovirus built from a near-atomic-resolution density map by cryoelectron microscopy. Compared with the structure of a nontranscribing cypovirus, the major capsid proteins of transcribing cypovirus undergo a series of conformational changes, giving rise to structural changes in the capsid shell: (i) an enlarged capsid chamber, which provides genomic RNA with more flexibility to move within the densely packed capsid, and (ii) a widened peripentonal channel in the capsid shell, which we confirmed to be a pathway for nascent mRNA. A rod-like structure attributable to a partially resolved nascent mRNA was observed in this channel. In addition, conformational change in the turret protein results in a relatively open turret at each fivefold axis. A GMP moiety, which is transferred to 5'-diphosphorylated mRNA during the mRNA capping reaction, was identified in the pocket-like guanylyltransferase domain of the turret protein.
External linksProc Natl Acad Sci U S A / PubMed:22492979 / PubMed Central
MethodsEM (single particle)
Resolution4.1 Å
Structure data

5376

3j17

EMDB-5376, PDB-3j17:
Structure of a transcribing cypovirus by cryo-electron microscopy
Method: EM (single particle) / Resolution: 4.1 Å

Source
  • bombyx mori cypovirus 1
KeywordsVIRUS / dsRNA virus Reoviridae transcribing cypovirus

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