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Structure paper

TitleTransport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 109, Page 5687-5692, Year 2012
Publish dateFeb 27, 2012 (structure data deposition date)
AuthorsEicher, T. / Cha, H.J. / Seeger, M.A. / Brandstatter, L. / El-Delik, J. / Bohnert, J.A. / Kern, W.V. / Verrey, F. / Grutter, M.G. / Diederichs, K. / Pos, K.M.
External linksProc. Natl. Acad. Sci. USA / PubMed:22451937
MethodsX-ray diffraction
Resolution1.9 - 2.9 Å
Structure data

PDB-4dx5:
Transport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4dx6:
Transport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

PDB-4dx7:
Transport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop
Method: X-RAY DIFFRACTION / Resolution: 2.253 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-LMT:
DODECYL-BETA-D-MALTOSIDE / detergent*YM

ChemComp-OCT:
N-OCTANE

ChemComp-D10:
DECANE

ChemComp-HEX:
HEXANE

ChemComp-D12:
DODECANE

ChemComp-MIY:
(4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- / medication, antibiotic*YM

ChemComp-C14:
TETRADECANE

ChemComp-LMU:
DODECYL-ALPHA-D-MALTOSIDE / detergent*YM

ChemComp-DD9:
nonane

ChemComp-SO4:
SULFATE ION

ChemComp-UND:
UNDECANE

ChemComp-HOH:
WATER

ChemComp-DM2:
DOXORUBICIN / medication, chemotherapy*YM

Source
  • escherichia coli (E. coli)
  • synthetic construct (others)
KeywordsMEMBRANE PROTEIN / TRANSPORT PROTEIN / DARPin / multidrug efflux protein

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