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Structure paper

TitleStructural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases.
Journal, issue, pagesJ. Mol. Biol., Vol. 402, Page 524-538, Year 2010
Publish dateSep 6, 2007 (structure data deposition date)
AuthorsTchigvintsev, A. / Xu, X. / Singer, A. / Chang, C. / Brown, G. / Proudfoot, M. / Cui, H. / Flick, R. / Anderson, W.F. / Joachimiak, A. ...Tchigvintsev, A. / Xu, X. / Singer, A. / Chang, C. / Brown, G. / Proudfoot, M. / Cui, H. / Flick, R. / Anderson, W.F. / Joachimiak, A. / Galperin, M.Y. / Savchenko, A. / Yakunin, A.F.
External linksJ. Mol. Biol. / PubMed:20691189
MethodsX-ray diffraction
Resolution1.8 - 2.35 Å
Structure data

PDB-2r6o:
Crystal structure of putative diguanylate cyclase/phosphodiesterase from Thiobacillus denitrificans
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3n3t:
Crystal structure of putative diguanylate cyclase/phosphodiesterase complex with cyclic di-gmp
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-C2E:
9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)

Source
  • thiobacillus denitrificans (bacteria)
KeywordsSTRUCTURAL GENOMICS / UNKNOWN FUNCTION / diguanylate cyclase / GGDEF and EAL domains / Thiobacillus denitrificans / PSI-2 / Protein Structure Initiative / Midwest Center for Structural Genomics / MCSG / TRANSFERASE / GGDEF & EAL DOMAINS

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