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Structure paper

TitleSubstitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase
Journal, issue, pagesJ. Mol. Biol., Vol. 396, Page 1081-1096, Year 2010
Publish dateAug 31, 2009 (structure data deposition date)
AuthorsYamashita, K. / Nakajima, Y. / Matsushita, H. / Nishiya, Y. / Yamazawa, R. / Wu, Y.F. / Matsubara, F. / Oyama, H. / Ito, K. / Yoshimoto, T.
External linksJ. Mol. Biol. / PubMed:20043918
MethodsX-ray diffraction
Resolution1.78 - 2.2 Å
Structure data

PDB-3a6d:
Creatininase complexed with 1-methylguanidine
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3a6e:
W174F mutant creatininase, type I
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3a6f:
W174F mutant creatininase, Type II
Method: X-RAY DIFFRACTION / Resolution: 1.78 Å

PDB-3a6g:
W154F mutant creatininase
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3a6h:
W154A mutant creatininase
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3a6j:
E122Q mutant creatininase complexed with creatine
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3a6k:
The E122Q mutant creatininase, Mn-Zn type
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3a6l:
E122Q mutant creatininase, Zn-Zn type
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-ZN:
Unknown entry

ChemComp-MGX:
1-METHYLGUANIDINE

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-CAC:
CACODYLATE ION

ChemComp-CL:
Unknown entry

ChemComp-CRN:
N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE

Source
  • pseudomonas putida (bacteria)
KeywordsHYDROLASE / creatinine amidohydrolase / urease-related amidohydrolase superfamily / closed form / creatinine amifohydrolase

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