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TitleEnzymological and structural studies of the mechanism of promiscuous substrate recognition by the oxidative DNA repair enzyme AlkB.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 106, Page 14315-14320, Year 2009
Publish dateJun 29, 2009 (structure data deposition date)
AuthorsYu, B. / Hunt, J.F.
External linksProc. Natl. Acad. Sci. USA / PubMed:19706517
MethodsX-ray diffraction
Resolution1.4 - 1.7 Å
Structure data

PDB-3i2o:
Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meA-T
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-3i3m:
Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate and methylated trinucleotide T-meC-T
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3i3q:
Crystal Structure of AlkB in complex with Mn(II) and 2-oxoglutarate
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-3i49:
Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meC-T
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

Chemicals

ChemComp-AKG:
2-OXOGLUTARIC ACID

ChemComp-FE2:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-MN:
Unknown entry

Source
  • escherichia coli (E. coli)
KeywordsOXIDOREDUCTASE/DNA / beta jellyroll / protein-DNA complex / Dioxygenase / DNA damage / DNA repair / Iron / Metal-binding / Oxidoreductase / OXIDOREDUCTASE-DNA COMPLEX

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