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Structure paper

TitleAdaptability and selectivity of human peroxisome proliferator-activated receptor (PPAR) pan agonists revealed from crystal structures
Journal, issue, pagesActa Crystallogr. ,Sect. D, Vol. 65, Page 786-795, Year 2009
Publish dateApr 30, 2008 (structure data deposition date)
AuthorsOyama, T. / Toyota, K. / Waku, T. / Hirakawa, Y. / Nagasawa, N. / Kasuga, J. / Hashimoto, Y. / Miyachi, H. / Morikawa, K.
External linksActa Crystallogr. ,Sect. D / PubMed:19622862
MethodsX-ray diffraction
Resolution2.01 - 3 Å
Structure data

PDB-2znn:
Human PPAR alpha ligand binding domain in complex with a synthetic agonist TIPP703
Method: X-RAY DIFFRACTION / Resolution: 2.01 Å

PDB-2zno:
Human PPAR gamma ligand binding domain in complex with a synthetic agonist TIPP703
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-2znp:
Human PPAR delta ligand binding domain in complex with a synthetic agonist TIPP204
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-2znq:
Human PPAR delta ligand binding domain in complex with a synthetic agonist TIPP401
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

Chemicals

ChemComp-S44:
(2S)-2-(4-propoxy-3-{[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]phenyl}carbonyl)amino]methyl}benzyl)butanoic acid

ChemComp-HOH:
WATER

ChemComp-B7G:
heptyl beta-D-glucopyranoside

ChemComp-K55:
(2S)-2-{4-butoxy-3-[({[2-fluoro-4-(trifluoromethyl)phenyl]carbonyl}amino)methyl]benzyl}butanoic acid

ChemComp-401:
(2S)-2-{3-[({[2-fluoro-4-(trifluoromethyl)phenyl]carbonyl}amino)methyl]-4-methoxybenzyl}butanoic acid

Source
  • homo sapiens (human)
KeywordsTRANSCRIPTION / NUCLEAR RECEPTOR / PROTEIN-LIGAND COMPLEX / PPAR / Activator / DNA-binding / Metal-binding / Nucleus / Receptor / Transcription regulation / Zinc-finger / Diabetes mellitus / Disease mutation / Obesity / Phosphoprotein

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