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Structure paper

TitleHigh-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens.
Journal, issue, pagesJ. Mol. Biol., Vol. 389, Page 846-862, Year 2009
Publish dateFeb 7, 2007 (structure data deposition date)
AuthorsPolyakov, K.M. / Boyko, K.M. / Tikhonova, T.V. / Slutsky, A. / Antipov, A.N. / Zvyagilskaya, R.A. / Popov, A.N. / Bourenkov, G.P. / Lamzin, V.S. / Popov, V.O.
External linksJ. Mol. Biol. / PubMed:19393666
MethodsX-ray diffraction
Resolution1.5 - 1.8 Å
Structure data

PDB-2ot4:
Structure of a hexameric multiheme c nitrite reductase from the extremophile bacterium Thiolkalivibrio nitratireducens
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-2zo5:
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with azide
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-3d1i:
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with nitrite
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-HEC:
HEME C

ChemComp-MRD:
(4R)-2-METHYLPENTANE-2,4-DIOL / precipitant*YM

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-CIT:
CITRIC ACID

ChemComp-HOH:
WATER

ChemComp-AZI:
AZIDE ION

ChemComp-NA:
Unknown entry

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-PG6:
1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-NO2:
NITRITE ION

Source
  • thioalkalivibrio nitratireducens (bacteria)
KeywordsOXIDOREDUCTASE / cytochrome c nitrite reductase / NrfA / sulfite reductase

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