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Structure paper

TitleA conformational transition in the structure of a 2'-thiomethyl-modified DNA visualized at high resolution.
Journal, issue, pagesChem. Commun. (Camb. ), Vol. 15, Page 2017-2019, Year 2009
Publish dateOct 17, 2008 (structure data deposition date)
AuthorsPallan, P.S. / Prakash, T.P. / Li, F. / Eoff, R.L. / Manoharan, M. / Egli, M.
External linksChem. Commun. (Camb. ) / PubMed:19333476
MethodsX-ray diffraction
Resolution1.04 - 1.6 Å
Structure data

PDB-3ey1:
A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High Resolution
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-3ey2:
A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High Resolution
Method: X-RAY DIFFRACTION / Resolution: 1.04 Å

PDB-3ey3:
A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High Resolution
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-N3D:
N-methylpropane-1,3-diamine

ChemComp-SR:
STRONTIUM ION

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

Source
  • bacillus halodurans (bacteria)
KeywordsHYDROLASE/DNA / RNase H-DNA COMPLEX / PROTEIN-DNA COMPLEX / ENDONUCLEASE / 2'-THIOMETHYL URIDINE RIBONUCLEIC ACID / Hydrolase / Magnesium / Manganese / Metal-binding / Nuclease / HYDROLASE-DNA COMPLEX / DNA / 2'-Thiomethyl modified DNA / modified sugar / nucleic acid structure. / Modified DNA duplex / 2'-thiomethyl uridine

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