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Structure paper

TitleResidues Asp164 and Glu165 at the substrate entryway function potently in substrate orientation of alanine racemase from E. coli: Enzymatic characterization with crystal structure analysis
Journal, issue, pagesProtein Sci., Vol. 17, Page 1066-1076, Year 2008
Publish dateOct 15, 2007 (structure data deposition date)
AuthorsWu, D. / Hu, T. / Zhang, L. / Chen, J. / Du, J. / Ding, J. / Jiang, H. / Shen, X.
External linksProtein Sci. / PubMed:18434499
MethodsX-ray diffraction
Resolution2.4 - 3 Å
Structure data

PDB-2rjg:
Crystal structure of biosynthetic alaine racemase from Escherichia coli
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-2rjh:
Crystal structure of biosynthetic alaine racemase in D-cycloserine-bound form from Escherichia coli
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3b8t:
Crystal structure of Escherichia coli alaine racemase mutant P219A
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-3b8u:
Crystal structure of Escherichia coli alaine racemase mutant E221A
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-3b8v:
Crystal structure of Escherichia coli alaine racemase mutant E221K
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-3b8w:
Crystal structure of Escherichia coli alaine racemase mutant E221P
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-PLP:
PYRIDOXAL-5'-PHOSPHATE

ChemComp-HOH:
WATER

ChemComp-DCS:
D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE

Source
  • escherichia coli (E. coli)
KeywordsISOMERASE / alpha/beta barrel / Cell shape / Cell wall biogenesis/degradation / Peptidoglycan synthesis / Pyridoxal phosphate

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