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Structure paper

TitleStructural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
Journal, issue, pagesJ. Mol. Biol., Vol. 352, Page 139-150, Year 2005
Publish dateOct 27, 2004 (structure data deposition date)
AuthorsLariviere, L. / Sommer, N. / Morera, S.
External linksJ. Mol. Biol. / PubMed:16081100
MethodsX-ray diffraction
Resolution1.73 - 2.8 Å
Structure data

PDB-1xv5:
alpha-glucosyltransferase (AGT) in complex with UDP
Method: X-RAY DIFFRACTION / Resolution: 1.73 Å

PDB-1y6f:
alpha-glucosyltransferase in complex with UDP-glucose and DNA containing an abasic site
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-1y6g:
alpha-glucosyltransferase in complex with UDP and a 13_mer DNA containing a HMU base at 2.8 A resolution
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-1y8z:
alpha-glucosyltransferase in complex with UDP and a 13-mer DNA containing a HMU base at 1.9 A resolution
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-1ya6:
alpha-glucosyltransferase in complex with UDP and a 13-mer DNA containing a central A:G mismatch
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-CL:
Unknown entry

ChemComp-UDP:
URIDINE-5'-DIPHOSPHATE / UDP*YM

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-UPG:
URIDINE-5'-DIPHOSPHATE-GLUCOSE

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-NCO:
COBALT HEXAMMINE(III)

Source
  • enterobacteria phage t4 (virus)
KeywordsTRANSFERASE / TRANSFERASE/DNA / TRANSFERASE-DNA COMPLEX / glycosyltransferase/DNA

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