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Structure paper

TitleStructural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Journal, issue, pagesNat. Struct. Mol. Biol., Vol. 12, Page 218-224, Year 2005
Publish dateJan 18, 2005 (structure data deposition date)
AuthorsSerganov, A. / Keiper, S. / Malinina, L. / Tereshko, V. / Skripkin, E. / Hobartner, C. / Polonskaia, A. / Phan, A.T. / Wombacher, R. / Micura, R. ...Serganov, A. / Keiper, S. / Malinina, L. / Tereshko, V. / Skripkin, E. / Hobartner, C. / Polonskaia, A. / Phan, A.T. / Wombacher, R. / Micura, R. / Dauter, Z. / Jaschke, A. / Patel, D.J.
External linksNat. Struct. Mol. Biol. / PubMed:15723077
MethodsX-ray diffraction
Resolution3 - 3.5 Å
Structure data

PDB-1ykq:
Crystal structure of Diels-Alder ribozyme
Method: X-RAY DIFFRACTION / Resolution: 3.5 Å

PDB-1ykv:
Crystal structure of the Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene
Method: X-RAY DIFFRACTION / Resolution: 3.3 Å

PDB-1yls:
Crystal structure of selenium-modified Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene
Method: X-RAY DIFFRACTION / Resolution: 3 Å

Chemicals

ChemComp-CD:
Unknown entry

ChemComp-MG:
Unknown entry

ChemComp-DAI:
(3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1',2']-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE

ChemComp-HOH:
WATER

KeywordsRNA / carbon-carbon bond / catalytic mechanism / RNA crystal structure / Diels-Alder reaction / ribozyme / carbon-carbon bond formation

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