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TitleThe crystal structures of four peptide deformylases bound to the antibiotic actinonin reveal two distinct types: a platform for the structure-based design of antibacterial agents.
Journal, issue, pagesJ. Mol. Biol., Vol. 320, Page 951-962, Year 2002
Publish dateMay 14, 2002 (structure data deposition date)
AuthorsGuilloteau, J.P. / Mathieu, M. / Giglione, C. / Blanc, V. / Dupuy, A. / Chevrier, M. / Gil, P. / Famechon, A. / Meinnel, T. / Mikol, V.
External linksJ. Mol. Biol. / PubMed:12126617
MethodsX-ray diffraction
Resolution1.87 - 2.6 Å
Structure data

PDB-1lqw:
Crystal Structure of S.aureus Peptide Deformylase
Method: X-RAY DIFFRACTION / Resolution: 1.87 Å

PDB-1lqy:
Crystal Structure of Bacillus stearothermophilus Peptide Deformylase Complexed with Antibiotic Actinonin
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-1lru:
Crystal Structure of E.coli Peptide Deformylase Complexed with Antibiotic Actinonin
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-1lry:
Crystal Structure of P. aeruginosa Peptide Deformylase Complexed with Antibiotic Actinonin
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-NI:
NICKEL (II) ION

ChemComp-BB2:
ACTINONIN / antitumor, antibiotic*YM

ChemComp-SO4:
SULFATE ION

Source
  • staphylococcus aureus (bacteria)
  • geobacillus stearothermophilus (bacteria)
  • escherichia coli (E. coli)
  • pseudomonas aeruginosa (bacteria)
KeywordsHYDROLASE / PDF / PEPTIDE DEFORMYLASE / ACTINONIN / INHIBITION / POLYPEPTIDE DEFORMYLASE

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