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TitleA viral RNA hijacks host machinery using dynamic conformational changes of a tRNA-like structure.
Journal, issue, pagesScience, Vol. 374, Issue 6570, Page 955-960, Year 2021
Publish dateNov 19, 2021
AuthorsSteve L Bonilla / Madeline E Sherlock / Andrea MacFadden / Jeffrey S Kieft /
PubMed AbstractViruses require multifunctional structured RNAs to hijack their host’s biochemistry, but their mechanisms can be obscured by the difficulty of solving conformationally dynamic RNA structures. Using ...Viruses require multifunctional structured RNAs to hijack their host’s biochemistry, but their mechanisms can be obscured by the difficulty of solving conformationally dynamic RNA structures. Using cryo–electron microscopy (cryo-EM), we visualized the structure of the mysterious viral transfer RNA (tRNA)–like structure (TLS) from the brome mosaic virus, which affects replication, translation, and genome encapsidation. Structures in isolation and those bound to tyrosyl-tRNA synthetase (TyrRS) show that this ~55-kilodalton purported tRNA mimic undergoes large conformational rearrangements to bind TyrRS in a form that differs substantially from that of tRNA. Our study reveals how viral RNAs can use a combination of static and dynamic RNA structures to bind host machinery through highly noncanonical interactions, and we highlight the utility of cryo-EM for visualizing small, conformationally dynamic structured RNAs.
External linksScience / PubMed:34793227 / PubMed Central
MethodsEM (single particle)
Resolution4.3 - 6.0 Å
Structure data

EMDB-24952, PDB-7sam:
tRNA-like Structure from Brome Mosaic Virus
Method: EM (single particle) / Resolution: 4.3 Å

EMDB-25023, PDB-7sc6:
tRNA-like Structure from Brome Mosaic Virus Bound to Tyrosyl-tRNA Synthetase from Phaseolus vulgaris. Conformation: Bound State 1.
Method: EM (single particle) / Resolution: 5.51 Å

EMDB-25041, PDB-7scq:
tRNA-like Structure from Brome Mosaic Virus Bound to Tyrosyl-tRNA Synthetase from Phaseolus vulgaris. Conformation: Bound State 2.
Method: EM (single particle) / Resolution: 6.0 Å

Source
  • brome mosaic virus
  • phaseolus vulgaris (French bean)
KeywordsRNA / Viral RNA / 3' UTR / RNA BINDING PROTEIN/RNA / tRNA-synthetase / RNA BINDING PROTEIN / RNA BINDING PROTEIN-RNA complex / RNA-protein complex

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