[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,659 items for (author: lin & q)

EMDB-63943:
Substrate-free human 26S proteasome purified by midnolin, 20S proteasome, RPTs and RPN11 part
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-65595:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl bound
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-65839:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl and Catch domain resolved
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-68472:
Structure of human 26S proteasome complexed with midnolin(1-111+337-468)
Method: single particle / : Liang L, Zhu C, Qin L

PDB-22mm:
Structure of human 26S proteasome complexed with midnolin(1-111+337-468)
Method: single particle / : Liang L, Zhu C, Qin L

PDB-9u7r:
Substrate-free human 26S proteasome purified by midnolin, 20S proteasome, RPTs and RPN11 part
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9w39:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl bound
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9wbg:
Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl and Catch domain resolved
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-51861:
dCas9 bound to on-target EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

EMDB-51862:
dCas9 bound to off-target 1 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

EMDB-51863:
dCas9 bound to off-target 2 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

EMDB-51864:
wtCas9 bound to off-target 1 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

PDB-9h4j:
dCas9 bound to on-target EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

PDB-9h4k:
dCas9 bound to off-target 1 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

PDB-9h4l:
dCas9 bound to off-target 2 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

PDB-9h4m:
wtCas9 bound to off-target 1 EMX1-1 (-)SC DNA minicircle
Method: single particle / : Smith QM, Rueda D

EMDB-64823:
PSI-LHCE supercomplex from Euglena gracilis
Method: single particle / : Bai TY, Mao ZY, Tian LR

EMDB-64824:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

PDB-9v7t:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

PDB-9v7u:
PSI-LHCE supercomplex from Euglena gracilis.
Method: single particle / : Bai TY, Mao ZY, Tian LR

EMDB-65106:
Type II-A CRISPR integrase complex, apo form
Method: single particle / : Li Z, Li Y, Wu Q, Lu M, Xiao Y

EMDB-65107:
Raw consensus map of Type II-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65108:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-65109:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vj8:
Type II-A CRISPR integrase complex, apo form
Method: single particle / : Li Z, Li Y, Wu Q, Lu M, Xiao Y

PDB-9vj9:
Type I-A CRISPR integrase prespacer catching complex, State I
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vja:
Type I-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

PDB-9vjb:
Type II-A CRISPR integrase pre-integration complex
Method: single particle / : Li ZX, Li YT, Lu ML, Xiao YB

EMDB-63691:
At S3 trimer
Method: single particle / : Zhang SS

EMDB-63692:
At S1+2S3 trimer
Method: single particle / : Zhang SS

EMDB-63695:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7r:
At S3 trimer
Method: single particle / : Zhang SS

PDB-9m7s:
At S1+2S3 trimer
Method: single particle / : Zhang SS

PDB-9m7w:
At 2S1+S3-tRNA trimer
Method: single particle / : Zhang SS

EMDB-75641:
Full-length BG505 HIV-1 Env expressed in VLP
Method: subtomogram averaging / : Duquette M, Villa E

EMDB-63775:
Focused refinement of RPN1 and the C-terminal helix of midnolin in the substrate-engaged human 26S proteasome
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63776:
Substrate-engaged human 26S proteasome bound to midnolin with RPT1 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63777:
Substrate-engaged human 26S proteasome bound to midnolin with RPT5 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63817:
Substrate-engaged human 26S proteasome bound to midnolin with RPT2 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-63850:
Focused refinement of 19S in the substrate-engaged human 26S proteasome bound to midnolin with RPT6 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9mbo:
Focused refinement of RPN1 and the C-terminal helix of midnolin in the substrate-engaged human 26S proteasome
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9mbp:
Substrate-engaged human 26S proteasome bound to midnolin with RPT1 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9mbq:
Substrate-engaged human 26S proteasome bound to midnolin with RPT5 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9u3l:
Substrate-engaged human 26S proteasome bound to midnolin with RPT2 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

PDB-9u4m:
Focused refinement of 19S in the substrate-engaged human 26S proteasome bound to midnolin with RPT6 at top of spiral staircase
Method: single particle / : Zhu C, Qin L, Liang L

EMDB-75112:
SK3D-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75120:
OX1-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75121:
SK5A-Matured apo state in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75122:
SK5B-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75123:
SK3D-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more