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- EMDB-27562: Postfusion Nipah virus fusion protein in complex with Fab 1H1, lo... -
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Open data
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Basic information
Entry | ![]() | |||||||||
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Title | Postfusion Nipah virus fusion protein in complex with Fab 1H1, low resolution reconstruction including the six helix bundle | |||||||||
![]() | Postfusion Nipah virus fusion protein in complex with Fab 1H1, low resolution reconstruction including the six helix bundle | |||||||||
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![]() | Nipah / Nipah virus / NiV / fusion / F / antibody / neutralizing / conserved epitope / neutralizing antibody / six helix bundle / VIRAL PROTEIN | |||||||||
Biological species | ![]() | |||||||||
Method | single particle reconstruction / cryo EM / Resolution: 3.9 Å | |||||||||
![]() | Byrne PO / Blade EG / McLellan JS | |||||||||
Funding support | ![]()
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![]() | ![]() Title: Postfusion Nipah virus fusion protein in complex with Fab 1H1 Authors: Byrne PO / Blade EG / McLellan JS | |||||||||
History |
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Structure visualization
Supplemental images |
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Downloads & links
-EMDB archive
Map data | ![]() | 684 MB | ![]() | |
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Header (meta data) | ![]() ![]() | 13.7 KB 13.7 KB | Display Display | ![]() |
FSC (resolution estimation) | ![]() | 20.8 KB | Display | ![]() |
Images | ![]() | 51.8 KB | ||
Masks | ![]() | 729 MB | ![]() | |
Others | ![]() ![]() ![]() | 362.8 MB 676.2 MB 676.3 MB | ||
Archive directory | ![]() ![]() | HTTPS FTP |
-Validation report
Summary document | ![]() | 1.1 MB | Display | ![]() |
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Full document | ![]() | 1.1 MB | Display | |
Data in XML | ![]() | 28.3 KB | Display | |
Data in CIF | ![]() | 37.4 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
EMDB pages | ![]() ![]() |
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Map
File | ![]() | ||||||||||||||||||||
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Annotation | Postfusion Nipah virus fusion protein in complex with Fab 1H1, low resolution reconstruction including the six helix bundle | ||||||||||||||||||||
Voxel size | X=Y=Z: 0.81 Å | ||||||||||||||||||||
Density |
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Symmetry | Space group: 1 | ||||||||||||||||||||
Details | EMDB XML:
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-Supplemental data
-Mask #1
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Projections & Slices |
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Density Histograms |
-Additional map: Additional Map
File | emd_27562_additional_1.map | ||||||||||||
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Annotation | Additional Map | ||||||||||||
Projections & Slices |
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Density Histograms |
-Half map: Half Map 1
File | emd_27562_half_map_1.map | ||||||||||||
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Annotation | Half Map 1 | ||||||||||||
Projections & Slices |
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Density Histograms |
-Half map: Half Map 2
File | emd_27562_half_map_2.map | ||||||||||||
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Annotation | Half Map 2 | ||||||||||||
Projections & Slices |
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Density Histograms |
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Sample components
-Entire : Postfusion Nipah virus fusion protein in complex with Fab 1H1
Entire | Name: Postfusion Nipah virus fusion protein in complex with Fab 1H1 |
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Components |
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-Supramolecule #1: Postfusion Nipah virus fusion protein in complex with Fab 1H1
Supramolecule | Name: Postfusion Nipah virus fusion protein in complex with Fab 1H1 type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#3 |
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Source (natural) | Organism: ![]() |
-Experimental details
-Structure determination
Method | cryo EM |
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![]() | single particle reconstruction |
Aggregation state | particle |
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Sample preparation
Buffer | pH: 8 |
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Vitrification | Cryogen name: ETHANE |
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Electron microscopy
Microscope | FEI TITAN KRIOS |
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Image recording | Film or detector model: GATAN K3 (6k x 4k) / Average electron dose: 70.0 e/Å2 |
Electron beam | Acceleration voltage: 300 kV / Electron source: ![]() |
Electron optics | Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Nominal defocus max: 2.5 µm / Nominal defocus min: 1.5 µm |
Experimental equipment | ![]() Model: Titan Krios / Image courtesy: FEI Company |