Pairwise fitting emdb-1711 on emdb-5114 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-5114 by gmfit(PID:4185878).





RANK[1] Corr.Coeff:0.708

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-5114)

display:



color:


BK channel with membrane density subtracted [Ngauss:20]



[Download the reference map]





Other Transformations
rank
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Corr.Coeff.
0.708
0.634
0.620
0.619
0.606
0.605
0.579
0.578
0.577
0.576







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5114.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.833769,0.538980,-0.119707 139.991939 center 0,0,0 model #1
move 124.178915,118.658308,117.865234 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5114)]

[Download the target GMM(emdb 1711)]

[Download gmfit result file(4185878)]