Pairwise fitting emdb-5168 on pdb-2w4a by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-2w4a by gmfit(PID:2990023).





RANK[10] Corr.Coeff:0.204

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

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color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-2w4a)

display:



color:


b'ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE           ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.468
0.413
0.411
0.395
0.394
0.393
0.391
0.367
0.343
0.204







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2w4a"(PDB-format) or 
 "2w4a"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.061735,-0.754049,-0.653910 132.733988 center 0,0,0 model #1
move -69.988334,17.709580,-45.497103 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!