Pairwise fitting pdb-4v4v on pdb-4v6k by gmfit










Pairwise fitting of target pdb-4v4v on reference pdb-4v6k by gmfit(PID:2826578).





RANK[1] Corr.Coeff:0.922

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v4v)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v4v)]







REFERENCE(pdb-4v6k)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.922
0.764
0.763
0.758
0.758
0.758
0.749
0.741
0.739
0.734







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6k"(PDB-format) or 
 "4v6k"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v4v"(PDB-format) or
  "4v4v"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.951179,0.100734,-0.291737 1.045564 center 0,0,0 model #1
move 8.806162,2.227282,2.262139 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!