Pairwise fitting emdb-1386 on emdb-6124 by gmfit










Pairwise fitting of target emdb-1386 on reference emdb-6124 by gmfit(PID:2786321).





RANK[3] Corr.Coeff:0.461

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1386)

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Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1386)]







REFERENCE(emdb-6124)

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color:


Structure of the F-actin-tropomyosin complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.529
0.509
0.461
0.459
0.301
0.274
0.270
0.260
0.251
0.225







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6124.map.gz", and read it.

  2.  Download the Target map "emd_1386.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.936906,0.043807,0.346827 73.243464 center 0,0,0 model #1
move 10.262304,1.394036,2.647888 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!