Pairwise fitting emdb-1384 on emdb-8156 by gmfit










Pairwise fitting of target emdb-1384 on reference emdb-8156 by gmfit(PID:1659223).





RANK[2] Corr.Coeff:0.707

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1384)

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Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1384)]







REFERENCE(emdb-8156)

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color:


Autoinhibited F-BAR protein Nervous Wreck (non-membrane-bound) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.729
0.707
0.615
0.612
0.294
0.212
0.207
0.179
0.177
0.169







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8156.map.gz", and read it.

  2.  Download the Target map "emd_1384.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.342686,-0.800864,0.491104 117.469121 center 0,0,0 model #1
move -0.601845,-6.589410,-22.822263 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!