Pairwise fitting emdb-1975 on pdb-3j8b by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-3j8b by gmfit(PID:1404260).





RANK[2] Corr.Coeff:0.419

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-3j8b)

display:



color:


b'MODEL OF THE HUMAN EIF3 PCI-MPN OCTAMER DOCKED INTO THE 43S-HCV IRES  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.451
0.419
0.401
0.384
0.381
0.362
0.353
0.351
0.351
0.331







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j8b"(PDB-format) or 
 "3j8b"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.788673,-0.357378,0.500275 90.436340 center 0,0,0 model #1
move 332.170581,-112.019783,330.556029 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!