Pairwise fitting emdb-1770 on emdb-2456 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-2456 by gmfit(PID:1225731).





RANK[5] Corr.Coeff:0.575

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-2456)

display:



color:


30S Ribosome Subunit Assembly Intermediates, Intermediate Group 4d [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.793
0.695
0.638
0.575
0.575
0.564
0.546
0.541
0.507
0.466







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2456.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.901188,-0.113610,-0.418275 126.463245 center 0,0,0 model #1
move -6.676491,0.040442,1.283414 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!