Pairwise fitting pdb-1k4r on pdb-2xkv by gmfit










Pairwise fitting of target pdb-1k4r on reference pdb-2xkv by gmfit(PID:1087243).





RANK[9] Corr.Coeff:0.274

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

display:



color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(pdb-2xkv)

display:



color:


b'ATOMIC MODEL OF THE SRP-FTSY EARLY CONFORMATION                       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.515
0.461
0.450
0.406
0.405
0.322
0.308
0.300
0.274
0.266







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2xkv"(PDB-format) or 
 "2xkv"(mmCIF-format), and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.694193,0.432789,0.575143 144.278549 center 0,0,0 model #1
move 98.969850,137.073170,235.681859 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!