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Yorodumi- PDB-6m78: Aromatic interactions drive the coupled folding and binding of th... -
+Open data
-Basic information
Entry | Database: PDB / ID: 6m78 | ||||||
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Title | Aromatic interactions drive the coupled folding and binding of the intrinsically disordered Sesbania mosaic virus VPg protein | ||||||
Components | (PolyproteinProteolysis) x 2 | ||||||
Keywords | HYDROLASE / Viral-Protein-genome-linked / complex / protease / PLANT VIRAL PROTEIN | ||||||
Function / homology | Function and homology information host cell membrane / viral process / serine-type endopeptidase activity / proteolysis / membrane Similarity search - Function | ||||||
Biological species | Sesbania mosaic virus | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
Authors | Dixit, K. / Karanth, N.M. / Nair, S. / Kumari, K. / Chakraborti, K.S. / Savithri, H.S. / Sarma, S.P. | ||||||
Citation | Journal: Biochemistry / Year: 2020 Title: Aromatic Interactions Drive the Coupled Folding and Binding of the Intrinsically Disordered Sesbania mosaic Virus VPg Protein. Authors: Dixit, K. / Karanth, N.M. / Nair, S. / Kumari, K. / Chakrabarti, K.S. / Savithri, H.S. / Sarma, S.P. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6m78.cif.gz | 195.6 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6m78.ent.gz | 161 KB | Display | PDB format |
PDBx/mmJSON format | 6m78.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/m7/6m78 ftp://data.pdbj.org/pub/pdb/validation_reports/m7/6m78 | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 32245.457 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Sesbania mosaic virus / Plasmid: pRSET C / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: Q9EB08 |
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#2: Protein | Mass: 9113.224 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Sesbania mosaic virus / Plasmid: pET21a / Production host: Escherichia coli BL21(DE3) (bacteria) / Strain (production host): BL21(DE3) / References: UniProt: Q9EB08 |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Details |
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