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Structure paper

TitleStructural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders
Journal, issue, pagesTo Be Published
Publish dateOct 23, 2023 (structure data deposition date)
AuthorsMiotto MC
External linksSearch PubMed
MethodsEM (single particle)
Resolution2.79 - 5.65 Å
Structure data

42458

8uq2

EMDB-42458, PDB-8uq2:
Structure of human RyR2-S2808D in the subprimed state
Method: EM (single particle) / Resolution: 2.98 Å

42459

8uq3

EMDB-42459, PDB-8uq3:
Structure of human RyR2-S2808D in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.18 Å

42460

8uq4

EMDB-42460, PDB-8uq4:
Structure of human RyR2-S2808D in the subprimed state in the presence of H2O2/NOC-12/GSH
Method: EM (single particle) / Resolution: 3.64 Å

42461

8uq5

EMDB-42461, PDB-8uq5:
Structure of human RyR2-S2808D in the primed state in the presence of Rapamycin
Method: EM (single particle) / Resolution: 3.96 Å

EMDB-42505: Raw consensus map of the Structure of human RyR2-S2808D in the subprimed state
Method: EM (single particle) / Resolution: 2.98 Å

EMDB-42581: Constituent EM map: Focused refinement TaF+TM+CTD of the Structure of human RyR2-S2808D in the subprimed state
Method: EM (single particle) / Resolution: 2.81 Å

EMDB-42582: Constituent EM map: Focused refinement Jsol+CSol of the Structure of human RyR2-S2808D in the subprimed state
Method: EM (single particle) / Resolution: 2.79 Å

EMDB-42583: Constituent EM map: Focused refinement NTD+SPRY+Calstabin-2 of the Structure of human RyR2-S2808D in the subprimed state
Method: EM (single particle) / Resolution: 2.79 Å

EMDB-42584: Constituent EM map: Focused refinement RY3&4 of the Structure of human RyR2-S2808D in the subprimed state
Method: EM (single particle) / Resolution: 3.37 Å

EMDB-42585: Constituent EM map: Focused refinement RY1&2 of the Structure of human RyR2-S2808D in the subprimed state
Method: EM (single particle) / Resolution: 3.36 Å

EMDB-42586: Constituent EM map: Focused refinement BSol2 of the Structure of human RyR2-S2808D in the subprimed state
Method: EM (single particle) / Resolution: 3.57 Å

EMDB-42703: Raw consensus map of the Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.53 Å

EMDB-42704: Constituent EM map: Focused refinement TaF+TM+CTD of the Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.18 Å

EMDB-42705: Constituent EM map: Focused refinement Jsol+CSol of the Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.1 Å

EMDB-42706: Constituent EM map: Focused refinement NTD+SPRY+Calstabin-2 of the Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.15 Å

EMDB-42707: Constituent EM map: Focused refinement BSol of the Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.76 Å

EMDB-42708: Constituent EM map: Focused refinement RY1&2 of the Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.95 Å

EMDB-42709: Constituent EM map: Focused refinement RY3&4 of the Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 4.39 Å

EMDB-42710: Constituent EM map: Focused refinement BSol2 of the Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 5.02 Å

EMDB-42711: Raw consensus map of the Structure of PKA phosphorylated human RyR2-R420W in the primed state
Method: EM (single particle) / Resolution: 3.13 Å

EMDB-42712: Constituent EM map: Focused refinement TaF+TM+CTD of the Structure of PKA phosphorylated human RyR2-R420W in the primed state
Method: EM (single particle) / Resolution: 2.91 Å

EMDB-42713: Constituent EM map: Focused refinement Jsol+CSol of the Structure of PKA phosphorylated human RyR2-R420W in the primed state
Method: EM (single particle) / Resolution: 2.91 Å

EMDB-42715: Constituent EM map: Focused refinement NTD+SPRY+Calstabin-2 of the Structure of PKA phosphorylated human RyR2-R420W in the primed state
Method: EM (single particle) / Resolution: 2.9 Å

EMDB-42716: Constituent EM map: Focused refinement RY1&2 of the Structure of PKA phosphorylated human RyR2-R420W in the primed state
Method: EM (single particle) / Resolution: 3.26 Å

EMDB-42717: Constituent EM map: Focused refinement RY3&4 of the Structure of PKA phosphorylated human RyR2-R420W in the primed state
Method: EM (single particle) / Resolution: 3.42 Å

EMDB-42718: Constituent EM map: Focused refinement BSol2 of the Structure of PKA phosphorylated human RyR2-R420W in the primed state
Method: EM (single particle) / Resolution: 3.74 Å

EMDB-42722: Raw consensus map of the Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.08 Å

EMDB-42723: Constituent EM map: Focused refinement TaF+TM+CTD of the Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 2.93 Å

EMDB-42724: Constituent EM map: Focused refinement Jsol+CSol of the Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 2.97 Å

EMDB-42725: Constituent EM map: Focused refinement NTD+SPRY+Calstabin-2 of the Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 2.91 Å

EMDB-42726: Constituent EM map: Focused refinement RY1&2 of the Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.38 Å

EMDB-42727: Constituent EM map: Focused refinement RY3&4 of the Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.19 Å

EMDB-42728: Constituent EM map: Focused refinement BSol2 of the Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.29 Å

EMDB-42729: Raw consensus map of the Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Method: EM (single particle) / Resolution: 3.52 Å

EMDB-42730: Constituent EM map: Focused refinement TaF+TM+CTD of the Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Method: EM (single particle) / Resolution: 3.21 Å

EMDB-42731: Constituent EM map: Focused refinement Jsol+CSol of the Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Method: EM (single particle) / Resolution: 3.2 Å

EMDB-42732: Constituent EM map: Focused refinement NTD+SPRY+Calstabin-2 of the Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Method: EM (single particle) / Resolution: 3.15 Å

EMDB-42733: Constituent EM map: Focused refinement RY1&2 of the Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Method: EM (single particle) / Resolution: 3.79 Å

EMDB-42734: Constituent EM map: Focused refinement RY3&4 of the Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Method: EM (single particle) / Resolution: 4.11 Å

EMDB-42735: Constituent EM map: Focused refinement BSol2 of the Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Method: EM (single particle) / Resolution: 5.65 Å

EMDB-42736: Raw consensus map of the Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Method: EM (single particle) / Resolution: 3.29 Å

EMDB-42737: Constituent EM map: Focused refinement TaF+TM+CTD of the Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Method: EM (single particle) / Resolution: 3.15 Å

EMDB-42738: Constituent EM map: Focused refinement JSol+CSol of the Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Method: EM (single particle) / Resolution: 3.03 Å

EMDB-42739: Constituent EM map: Focused refinement NTD+SPRY+Calstabin-2 of the Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Method: EM (single particle) / Resolution: 3.01 Å

EMDB-42740: Constituent EM map: Focused refinement RY1&2 of the Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Method: EM (single particle) / Resolution: 3.53 Å

EMDB-42741: Constituent EM map: Focused refinement RY3&4 of the Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Method: EM (single particle) / Resolution: 3.82 Å

EMDB-42742: Constituent EM map: Focused refinement BSol2 of the Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Method: EM (single particle) / Resolution: 4.61 Å

42759

8uxc

EMDB-42759, PDB-8uxc:
Structure of PKA phosphorylated human RyR2-R420Q in the primed state
Method: EM (single particle) / Resolution: 2.86 Å

42761

8uxe

EMDB-42761, PDB-8uxe:
Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.53 Å

42762

8uxf

EMDB-42762, PDB-8uxf:
Structure of PKA phosphorylated human RyR2-R420W in the primed state
Method: EM (single particle) / Resolution: 3.13 Å

42763

8uxg

EMDB-42763, PDB-8uxg:
Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Method: EM (single particle) / Resolution: 3.08 Å

42764

8uxh

EMDB-42764, PDB-8uxh:
Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Method: EM (single particle) / Resolution: 3.52 Å

42765

8uxi

EMDB-42765, PDB-8uxi:
Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Method: EM (single particle) / Resolution: 3.29 Å

42768

8uxl

EMDB-42768, PDB-8uxl:
Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium and calmodulin
Method: EM (single particle) / Resolution: 3.12 Å

42769

8uxm

EMDB-42769, PDB-8uxm:
Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium and calmodulin
Method: EM (single particle) / Resolution: 3.56 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM / Adenosine triphosphate

ChemComp-KVR:
4-[(7-methoxy-2,3-dihydro-1,4-benzothiazepin-4(5H)-yl)methyl]benzoic acid

ChemComp-CA:
Unknown entry

Source
  • homo sapiens (human)
KeywordsMEMBRANE PROTEIN / calcium channel / TRANSPORT PROTEIN

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