[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 53 items for (author: marlovits & tc)

EMDB-16424:
F-actin decorated by SipA497-669

EMDB-16425:
F-actin decorated by SipA426-685

EMDB-16805:
Cryo-EM structure of PcrV/Fab(30-B8)

EMDB-16807:
Cryo-EM structure of PcrV/Fab(11-E5)

EMDB-15362:
Cryo-EM structure of Darobactin 22 bound BAM complex

EMDB-15363:
Cryo-EM structure of Darobactin 9 bound BAM complex

EMDB-15085:
RuvAB branch migration motor complexed to the Holliday junction - composite map 1 and 2

EMDB-13294:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t2 dataset]

EMDB-13295:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset]

EMDB-13296:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s3 [t2 dataset]

EMDB-13297:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s4 [t2 dataset]

EMDB-13298:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s5 [t2 dataset]

EMDB-13299:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t2 dataset]

EMDB-13300:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0-A [t2 dataset]

EMDB-13301:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t1 dataset]

EMDB-13302:
RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t1 dataset]

EMDB-13303:
RuvAB branch migration motor complexed to the Holliday junction - RuvA-HJ core [t2 dataset]

EMDB-13304:
RuvAB branch migration motor complexed to the Holliday junction - RuvAB-HJ half [dataset t2]

EMDB-13305:
RuvAB branch migration motor complexed to the Holliday junction - RuvAB-HJ pseudo half [dataset t2]

EMDB-15126:
RuvAB branch migration motor complexed to the Holliday junction - full tripartite particle [dataset t2]

EMDB-13542:
HsPepT1 bound to Ala-Phe in the outward facing occluded conformation

EMDB-13543:
HsPepT1 bound to Ala-Phe in the outward facing open conformation

EMDB-13544:
HsPepT2 bound to Ala-Phe in the inward facing partially occluded conformation

EMDB-13545:
Apo HsPepT1 in the outward facing open conformation

EMDB-13054:
Cryo-EM structure of nonameric EPEC SctV-C

EMDB-11311:
Structure of the Salmonella PrgI needle filament attached to the basal body

EMDB-11312:
Structure of the Shigella MxiH needle filament attached to the basal body

EMDB-12514:
Structure of an intact ESX-5 inner membrane complex, C1 symmetry

EMDB-12517:
Structure of an intact ESX-5 inner membrane complex, C3 symmetry

EMDB-12521:
MycP5-free ESX-5 inner membrane complex, state I

EMDB-12522:
MycP5-free ESX-5 inner membrane complex, State II

EMDB-12518:
Structure of the periplasmic assembly from the ESX-5 inner membrane complex, C1 symmetry

EMDB-12519:
Periplasmic assembly of the intact ESX-5 inner membrane complex, C3 symmetry

EMDB-12520:
Cytosolic bridge of an intact ESX-5 inner membrane complex

EMDB-12523:
Structure of an intact ESX-5 inner membrane complex, EccC5 extended

EMDB-12525:
Structure of an intact ESX-5 inner membrane complex, EccC contracted

EMDB-11780:
Apo-state type 3 secretion system export apparatus complex from Salmonella enterica typhimurium

EMDB-11781:
Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium - SpaR state 1

EMDB-10220:
Cryo-EM structure of rhinovirus-B5 complexed to antiviral OBR-5-340

EMDB-10221:
Cryo-EM structure of rhinovirus-B5

EMDB-10222:
Cryo-EM structure of rhinovirus-A89

EMDB-3596:
The structure of the ESX-5 mycobacterial type VII secretion system membrane complex

EMDB-2480:
Tomogram of Injectisome (wild type) from Salmonella typhiumurium (substrate trapped) in situ

EMDB-2481:
Injectisome (wild type) from Salmonella typhimurium (substrate free)

EMDB-2482:
Injectisome (wild type) from Salmonella typhimurium (substrate trapped)

EMDB-2483:
Tomogram of Injectisome (wild type) from Salmonella typhimurium (substrate free) in situ

EMDB-1871:
Three-dimensional model of Salmonella's needle complex at subnanometer resolution

EMDB-1874:
Three-dimensional model of Salmonella's needle complex at subnanometer resolution

EMDB-1875:
Three dimensional structure of the injectisome

EMDB-1214:
Assembly of the inner rod determines needle length in the type III secretion injectisome.

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more