[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 67 items for (author: kopylov & m)

EMDB-44737:
WT Pseudomonas phage PP7 capped tube VLP

EMDB-44743:
WT Pseudomonas phage PP7 open tube VLP

EMDB-44767:
C2 cage of PP7-AY-PP7: Pseudomonas phage PP7 coat protein dimer

EMDB-44768:
C3 cage of PP7-AY-PP7: Pseudomonas phage PP7 coat protein dimer

EMDB-44773:
D5 cage of PP7-AY-PP7: Pseudomonas phage PP7 coat protein dimer

EMDB-44782:
D5E cage of PP7-AY-PP7: Pseudomonas phage PP7 coat protein dimer

EMDB-44783:
Icosahedral T=3 cage of PP7-AY-PP7: Pseudomonas phage PP7 coat protein dimer

EMDB-44788:
Icosahedral T=4 cage of PP7-AY-PP7: Pseudomonas phage PP7 coat protein dimer

EMDB-42371:
Mouse apoferritin imaged with a square aperture

EMDB-42372:
Mouse apoferritin imaged with a round aperture

EMDB-42373:
Mouse apoferritin imaged with a square aperture with P2 projection lens rotation, reconstructed from 25,000 particles

EMDB-42374:
Mouse apoferritin imaged with a round aperture without P2 projection lens rotation, reconstructed from 25,000 particles

EMDB-42851:
5x5 tiled montage tomogram of a holey carbon grid with apoferritin imaged with a square electron beam

EMDB-42879:
3x3 tiled montage tomogram of a yeast lamella imaged with a square electron beam

EMDB-43013:
Myxococcus xanthus HEnc-K417N(A) protein shell with icosahedral T=1 symmetry

EMDB-43016:
Myxococcus xanthus HEnc-K417N(A) protein shell with tetrahedral symmetry (12 pentamers, 4 hexamers)

EMDB-43037:
Myxococcus xanthus HEnc-K417N(A) protein shell with D3 symmetry (12 pentamers, 3 hexamers)

EMDB-43038:
Myxococcus xanthus HEnc-K417N(A) protein shell with D6 symmetry (12 pentamers, 8 hexamers)

EMDB-43039:
Myxococcus xanthus HEnc-K417N(A) protein shell with C2 symmetry (12 pentamers, 9 hexamers)

EMDB-43040:
Myxococcus xanthus HEnc-K417N(A) protein shell with D3 symmetry (12 pentamers, 11 hexamers)

EMDB-43041:
Myxococcus xanthus HEnc-K417N(A) protein shell with D2 symmetry (12 pentamers, 12 hexamers)

EMDB-43042:
Myxococcus xanthus HEnc-K417N(A) protein shell with D2 symmetry (12 pentamers, 14 hexamers)

EMDB-43043:
Myxococcus xanthus HEnc-K417N(A) protein shell with D5 symmetry (12 pentamers, 15 hexamers)

EMDB-43113:
Myxococcus xanthus EncA WT protein shell with icosahedral symmetry T=3

EMDB-43036:
Myxococcus xanthus HEnc-K417N(A) protein shell with icosahedral T=3 symmetry

EMDB-29027:
CryoEM structure of bacteriophage Q-beta coat protein dimer with AYGG linker

PDB-8feh:
CryoEM structure of bacteriophage Q-beta coat protein dimer with AYGG linker

EMDB-41919:
Structure of E.coli beta-Galactosidase from a multi-species dataset

EMDB-41923:
Structure of human Apoferritin from a multi-species dataset

EMDB-41924:
Structure of Tobacco Mosaic Virus from a multi-species dataset

EMDB-41917:
CryoEM structure of PP7 virus-like particle from a multi-species dataset

EMDB-28022:
Adeno-associated virus type 2 VLP displaying M2 peptide

EMDB-28040:
Adeno-associated virus type 2 VLP displaying Linker peptide

EMDB-29028:
CryoEM structure of Conalbumin from chicken egg white (sigma-Cas 1391-06-6)

PDB-8fei:
CryoEM structure of Conalbumin from chicken egg white (sigma-Cas 1391-06-6)

EMDB-26396:
CryoET of E. coli prepared with the Waffle Method

EMDB-24181:
The structure of bovine thyroglobulin with iodinated tyrosines

PDB-7n4y:
The structure of bovine thyroglobulin with iodinated tyrosines

EMDB-21108:
Structure of DNA Polymerase Zeta (Apo)

EMDB-21115:
Structure of DNA Polymerase Zeta/DNA/dNTP Ternary Complex

PDB-6v8p:
Structure of DNA Polymerase Zeta (Apo)

PDB-6v93:
Structure of DNA Polymerase Zeta/DNA/dNTP Ternary Complex

EMDB-22078:
Characterization of the SARS-CoV-2 S Protein: Biophysical, Biochemical, Structural, and Antigenic Analysis

PDB-6x6p:
Characterization of the SARS-CoV-2 S Protein: Biophysical, Biochemical, Structural, and Antigenic Analysis

EMDB-21479:
Class 2 from 3D classification of Bacillus subtilus delta HPF ribosomes

EMDB-21480:
Class 3 from 3D classification of Bacillus subtilus delta HPF ribosomes

EMDB-21467:
Consensus map of a delta hpf 70S ribosome from Bacillus subtilis subsp. subtilis str. 168

EMDB-21478:
Class1 from classification of Bacillus subtilus delta HPF ribosomes

EMDB-20521:
Horse spleen apoferritin light chain

PDB-6pxm:
Horse spleen apoferritin light chain

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more