[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 81 items for (author: gan & sy)

EMDB-19406:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12

EMDB-19407:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24

PDB-8rox:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12

PDB-8roy:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24

EMDB-28138:
3D reconstruction of the apical complex of Plasmodium falciparum (3D7) free merozoite

EMDB-28141:
3D reconstruction of the apical complex of Plasmodium falciparum (3D7) free merozoite

EMDB-28142:
3D Reconstruction of Plasmodium falciparum (3D7) free merozoite

EMDB-42804:
Structure of nucleotide-free Pediculus humanus (Ph) PINK1 dimer

EMDB-42806:
Structure of AMP-PNP-bound Pediculus humanus (Ph) PINK1 dimer

EMDB-42807:
Structure of ADP-bound and phosphorylated Pediculus humanus (Ph) PINK1 dimer

PDB-8uyf:
Structure of nucleotide-free Pediculus humanus (Ph) PINK1 dimer

PDB-8uyh:
Structure of AMP-PNP-bound Pediculus humanus (Ph) PINK1 dimer

PDB-8uyi:
Structure of ADP-bound and phosphorylated Pediculus humanus (Ph) PINK1 dimer

EMDB-36887:
Structure of GPR34-Gi complex

EMDB-28125:
Plasmodium falciparum merozoites apical 2-ring units

EMDB-28126:
Toxoplasma apical rings

EMDB-28910:
Glycan-Base ConC Env Trimer

PDB-8f7t:
Glycan-Base ConC Env Trimer

EMDB-27630:
Structure of the PEAK3/14-3-3 complex

EMDB-27684:
Structure of the PEAK3 pseudokinase homodimer

PDB-8dp5:
Structure of the PEAK3/14-3-3 complex

PDB-8ds6:
Structure of the PEAK3 pseudokinase homodimer

EMDB-29396:
Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP

EMDB-29836:
vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer

EMDB-29880:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 1)

EMDB-29881:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 2)

EMDB-29882:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 3)

EMDB-29905:
vFP48.02 Fab in complex with BG505 DS-SOSIP Env trimer

PDB-8fr6:
Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP

PDB-8g85:
vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer

PDB-8g9w:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 1)

PDB-8g9x:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 2)

PDB-8g9y:
Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 3)

PDB-8gas:
vFP48.02 Fab in complex with BG505 DS-SOSIP Env trimer

EMDB-28139:
Toxoplasma gondii apical complex (ionophore stimulated)

EMDB-28140:
Toxoplasma gondii apical complex (non-stimulated)

EMDB-13776:
Structure of formaldehyde cross-linked SARS-CoV-2 S glycoprotein

PDB-7q1z:
Structure of formaldehyde cross-linked SARS-CoV-2 S glycoprotein

EMDB-25677:
Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1

EMDB-25678:
Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with kinked alpha-C helix in chain B

EMDB-25679:
Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with extended alpha-C helix in chain B

EMDB-25680:
Structure of dodecameric unphosphorylated Pediculus humanus (Ph) PINK1 D357A mutant

EMDB-25681:
Structure of dimeric unphosphorylated Pediculus humanus (Ph) PINK1 D357A mutant

PDB-7t4k:
Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with kinked alpha-C helix in chain B

PDB-7t4l:
Structure of dimeric phosphorylated Pediculus humanus (Ph) PINK1 with extended alpha-C helix in chain B

PDB-7t4m:
Structure of dodecameric unphosphorylated Pediculus humanus (Ph) PINK1 D357A mutant

PDB-7t4n:
Structure of dimeric unphosphorylated Pediculus humanus (Ph) PINK1 D357A mutant

EMDB-30883:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)

EMDB-30884:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)

EMDB-30885:
Cryo-EM map of Dengue virus serotype 2 strain PVP94/07 in complex with human antibody 1C19 Fab at 37 deg C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more