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Showing 1 - 50 of 54 items for (author: j. & king)

PDB-8vq9:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vqa:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vqb:
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8gat:
Structure of human NDS.1 Fab and 1G01 Fab in complex with influenza virus neuraminidase from A/Indiana/10/2011 (H3N2v), based on consensus cryo-EM map with only Fab 1G01 resolved
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

PDB-8gau:
Structure of human NDS.1 Fab and 1G01 Fab in complex with influenza virus neuraminidase from A/Indiana/10/2011 (H3N2v)
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

PDB-8gav:
Structure of human NDS.3 Fab in complex with influenza virus neuraminidase from A/Darwin/09/2021 (H3N2)
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

PDB-8ur5:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-1heptad-I53_dn5 (local refinement of TH-1heptad)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8ur7:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-6heptad-I53_dn5 (local refinement of TH-6heptad)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8u0t:
PRD-0038 RBD bound to Rhinolophus alcyone ACE2 (local refinement)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8u29:
Prefusion structure of the PRD-0038 spike glycoprotein ectodomain trimer
Method: single particle / : Lee J, Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8g8w:
Molecular mechanism of nucleotide inhibition of human uncoupling protein 1
Method: single particle / : Gogoi P, Jones SA, Ruprecht JJ, King MS, Lee Y, Zogg T, Pardon E, Chand D, Steimle S, Copeman D, Cotrim CA, Steyaert J, Crichton PG, Moiseenkova-Bell V, Kunji ERS

PDB-8fwd:
Fast and versatile sequence- independent protein docking for nanomaterials design using RPXDock
Method: single particle / : Skotheim R, Borst AJ, Baker D

PDB-8f4x:
Top-down design of protein architectures with reinforcement learning
Method: single particle / : Borst AJ, Baker D

PDB-8f53:
Top-down design of protein architectures with reinforcement learning
Method: single particle / : Borst AJ, Baker D

PDB-8f54:
Top-down design of protein architectures with reinforcement learning
Method: single particle / : Borst AJ, Baker D

PDB-8asi:
Four subunit cytochrome b-c1 complex from Rhodobacter sphaeroides in native nanodiscs - consensus refinement in the b-b conformation
Method: single particle / : Swainsbury DJK, Hawkings FR, Martin EC, Musial S, Salisbury JH, Jackson PJ, Farmer DA, Johnson MP, Siebert CA, Hitchcock A, Hunter CN

PDB-8asj:
Four subunit cytochrome b-c1 complex from Rhodobacter sphaeroides in native nanodiscs - focussed refinement in the b-c conformation
Method: single particle / : Swainsbury DJK, Hawkings FR, Martin EC, Musial S, Salisbury JH, Jackson PJ, Farmer DA, Johnson MP, Siebert CA, Hitchcock A, Hunter CN

PDB-8c6d:
Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
Method: single particle / : Kingston NJ, Snowden JS, Stonehouse NJ, Rowlands DJ, Hogle JM

PDB-7zq8:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=4 VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

PDB-7zqa:
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=3* VLP)
Method: single particle / : Kingston NJ, Grehan K, Snowden JS, Alzahrani J, Ranson NA, Rowlands DJ, Stonehouse NJ

PDB-7xue:
Cryo-EM structure of HK022 putRNA-associated E.coli RNA polymerase elongation complex
Method: single particle / : Hwang SH, Kang JY

PDB-7xug:
cryo-EM structure of HK022 putRNA-less E.coli RNA polymerase elongation complex
Method: single particle / : Hwang S, Kang JY

PDB-7xui:
Cryo-EM structure of sigma70 bound HK022 putRNA-associated E.coli RNA polymerase elongation complex
Method: single particle / : Hwang S, Kang JY

PDB-7zxy:
3.15 Angstrom cryo-EM structure of the dimeric cytochrome b6f complex from Synechocystis sp. PCC 6803 with natively bound plastoquinone and lipid molecules.
Method: single particle / : Malone LA, Procter MS, Farmer DF, Swainsbury DJK, Hawkings FR, Pastorelli F, Emrich-Mills TZ, Siebert A, Hunter CN, Hitchcock A, Johnson MP

PDB-7u2q:
Influenza Neuraminidase N1-CA09-sNAp-155
Method: single particle / : Acton OJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-7u2t:
Influenza Neuraminidase N1-MI15-sNAp-174
Method: single particle / : Acton OJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-7aef:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 3-fold symmetry.
Method: single particle / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

PDB-7adz:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the cap portion in extended state.
Method: single particle / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

PDB-7ae0:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the sheath-tube module in extended state.
Method: helical / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

PDB-7aeb:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the baseplate complex in extended state applied 6-fold symmetry.
Method: single particle / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

PDB-7aek:
Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the contracted sheath shell.
Method: helical / : Xu J, Ericson C, Feldmueller M, Lien YW, Pilhofer M

PDB-7kna:
Localized reconstruction of the H1 A/Michigan/45/2015 ectodomain displayed at the surface of I53_dn5 nanoparticle
Method: single particle / : Acton OJ, Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-7ast:
Apo Human RNA Polymerase III
Method: single particle / : Ramsay EP, Abascal-Palacios G, Daiss JL, King H, Gouge J, Pilsl M, Beuron F, Morris E, Gunkel P, Engel C, Vannini A

PDB-7jlu:
Structure of the activated Roq1 resistosome directly recognizing the pathogen effector XopQ
Method: single particle / : Martin R, Qi T, Zhang H, Lui F, King M, Toth C, Nogales E, Staskawicz BJ

PDB-7jlv:
Structure of the activated Roq1 resistosome directly recognizing the pathogen effector XopQ
Method: single particle / : Martin R, Qi T, Zhang H, Lui F, King M, Toth C, Nogales E, Staskawicz BJ

PDB-7jlx:
Structure of the activated Roq1 resistosome directly recognizing the pathogen effector XopQ (TIR domains)
Method: single particle / : Martin R, Qi T, Zhang H, Lui F, King M, Toth C, Nogales E, Staskawicz BJ

PDB-6v9v:
Structure of TRPA1 modified by Bodipy-iodoacetamide with bound calcium, LMNG
Method: single particle / : Zhao J, Lin King JV, Paulsen CE, Cheng Y, Julius D

PDB-6v9w:
Structure of TRPA1 (ligand-free) with bound calcium, LMNG
Method: single particle / : Zhao J, Lin King JV, Paulsen CE, Cheng Y, Julius D

PDB-6v9x:
Structure of TRPA1 modified by iodoacetamide, PMAL-C8
Method: single particle / : Zhao J, Lin King JV, Paulsen CE, Cheng Y, Julius D

PDB-6v9y:
Structure of TRPA1 bound with A-967079, PMAL-C8
Method: single particle / : Zhao J, Lin King JV, Paulsen CE, Cheng Y, Julius D

PDB-6mb3:
Cryo-EM structure of the circumsporozoite protein of Plasmodium falciparum with a vaccine-elicited antibody reveals maturation of inter-antibody contacts
Method: single particle / : Cottrell CA, Torres JL, Ward AB

PDB-6mhg:
Cryo-EM structure of the circumsporozoite protein of Plasmodium falciparum with a vaccine-elicited antibody reveals maturation of inter-antibody contacts
Method: single particle / : Cottrell CA, Torres JL, Ward AB

PDB-6a90:
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana and Dc1a
Method: single particle / : Shen HZ, li ZQ, Jiang Y, Pan XJ, Wu JP, Cristofori-Armstrong B, Smith JJ, Chin YKY, Lei JL, Zhou Q, King GF, Yan N

PDB-6a91:
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with saxitoxin and Dc1a
Method: single particle / : Shen HZ, li ZQ, Jiang Y, Pan XJ, Wu JP, Cristofori-Armstrong B, Smith JJ, Chin YKY, Lei JL, Zhou Q, King GF, Yan N

PDB-6a95:
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with tetrodotoxin and Dc1a
Method: single particle / : Shen HZ, li ZQ, Jiang Y, Pan XJ, Wu JP, Cristofori-Armstrong B, Smith JJ, Chin YKY, Lei JL, Zhou Q, King GF, Yan N

PDB-5uu5:
Bacteriophage P22 mature virion capsid protein
Method: single particle / : Hryc CF, Chen DH, Afonine PV, Jakana J, Wang Z, Haase-Pettingell C, Jiang W, Adams PD, King JA, Schmid MF, Chiu W

PDB-5kp9:
Structure of Nanoparticle Released from Enveloped Protein Nanoparticle
Method: single particle / : Votteler J, Ogohara C, Yi S, Hsia Y, Natterman U, Belnap DM, King NP, Sundquist WI

PDB-5gai:
Probabilistic Structural Models of Mature P22 Bacteriophage Portal, Hub, and Tailspike proteins
Method: single particle / : Pintilie G, Chen DH, Haase-Pettingell CA, King JA, Chiu W

PDB-4bml:
C-alpha backbone trace of major capsid protein gp39 found in marine virus Syn5.
Method: single particle / : Gipson P, Baker ML, Raytcheva D, Haase-Pettingell C, Piret J, King J, Chiu W

PDB-3j40:
Validated Near-Atomic Resolution Structure of Bacteriophage Epsilon15 Derived from Cryo-EM and Modeling
Method: single particle / : Baker ML, Hryc CF, Zhang Q, Wu W, Jakana J, Haase-Pettingell C, Afonine PV, Adams PD, King JA, Jiang W, Chiu W

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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