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1 - 50 of 86 for "author ( j., frank )"
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PDB-3j8e

Cryo-EM structure of ryanodine receptor/Calstabin-2 complex
by single particle reconstruction, at 4.8 A resolution, submitted on 2014-10-16
Zalk R, Clarke OB, des Georges A, Grassucci RA, Reiken S, Mancia F, Hendrickson WA, Frank J, Marks AR

PDB-3j7v

Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
by single particle (icosahedral) reconstruction, at 4.6 A resolution, submitted on 2014-08-12
Guo F, Liu Z, Fang PA, Zhang Q, Wright ET, Wu W, Zhang C, Vago F, Ren Y, Jakata J, Chiu W, Serwer P, Jiang W

PDB-3j7w

Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
by single particle (icosahedral) reconstruction, at 3.5 A resolution, submitted on 2014-08-12
Guo F, Liu Z, Fang PA, Zhang Q, Wright ET, Wu W, Zhang C, Vago F, Ren Y, Jakata J, Chiu W, Serwer P, Jiang W

PDB-3j7x

Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
by single particle (icosahedral) reconstruction, at 3.6 A resolution, submitted on 2014-08-12
Guo F, Liu Z, Fang PA, Zhang Q, Wright ET, Wu W, Zhang C, Vago F, Ren Y, Jakata J, Chiu W, Serwer P, Jiang W

PDB-3j5y

Structure of the mammalian ribosomal pre-termination complex associated with eRF1-eRF3-GDPNP
by single particle reconstruction, at 9.7 A resolution, submitted on 2013-11-21
des Georges A, Hashem Y, Unbehaun A, Grassucci RA, Taylor D, Hellen CUT, Pestova TV, Frank J

PDB-4c4q

Cryo-EM map of the CSFV IRES in complex with the small ribosomal 40S subunit and DHX29
by single particle reconstruction, at 8.5 A resolution, submitted on 2013-09-07
Hashem Y, desGeorges A, Dhote V, Langlois R, Liao HY, Grassucci RA, Pestova TV, Hellen CUT, Frank J

PDB-3j3x

Independent reconstruction of Mm-cpn cryo-EM density map from half dataset in the closed state (training map)
by single particle reconstruction, at 4.3 A resolution, submitted on 2013-05-02
DiMaio F, Zhang J, Chiu W, Baker D

PDB-4blf

Variable internal flexibility characterizes the helical capsid formed by Agrobacterium VirE2 protein on single-stranded DNA.
by helical reconstruction, at 20.0 A resolution, submitted on 2013-05-02
Bharat TAM, Zbaida D, Eisenstein M, Frankenstein Z, Mehlman T, Weiner L, Sorzano COS, Barak Y, Albeck S, Briggs JAG, Wolf SG, Elbaum M

PDB-4v6v

Tetracycline resistance protein Tet(O) bound to the ribosome
by single particle reconstruction, at 9.8 A resolution, submitted on 2013-02-25
Li W, Atkinson GC, Thakor NS, Allas U, Lu C, Chan KY, Tenson T, Schulten K, Wilson KS, Hauryliuk V, Frank J

PDB-4v8m

High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome
by single particle reconstruction, at 5.57 A resolution, submitted on 2012-12-09
Hashem Y, des Georges A, Fu J, Buss SN, Jossinet F, Jobe A, Zhang Q, Liao HY, Grassucci RA, Bajaj C, Westhof E, Madison-Antenucci S, Frank J

PDB-4v6u

Promiscuous behavior of proteins in archaeal ribosomes revealed by cryo-EM: implications for evolution of eukaryotic ribosomes
by single particle reconstruction, at 6.6 A resolution, submitted on 2012-08-09
Armache JP, Anger AM, Marquez V, Frankenberg S, Froehlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN

PDB-3j1w

A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
by single particle reconstruction, submitted on 2012-07-10
Sgourakis NG, Worrall LJ, Strynadka NCJ, Baker D

PDB-3j1x

A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
by single particle reconstruction, submitted on 2012-07-10
Sgourakis NG, Bergeron JRC, Worrall LJ, Strynadka NCJ, Baker D

PDB-3j1v

A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
by single particle reconstruction, submitted on 2012-07-08
Sgourakis NG, Bergeron JRC, Strynadka NJC, Baker D

PDB-4v6s

Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)
by single particle reconstruction, at 13.1 A resolution, submitted on 2011-12-09
Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6p

Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
by single particle reconstruction, at 13.5 A resolution, submitted on 2011-12-08
Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6q

Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)
by single particle reconstruction, at 11.5 A resolution, submitted on 2011-12-08
Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6r

Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)
by single particle reconstruction, at 11.5 A resolution, submitted on 2011-12-08
Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6n

Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
by single particle reconstruction, at 12.1 A resolution, submitted on 2011-12-07
Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6o

Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
by single particle reconstruction, at 14.7 A resolution, submitted on 2011-12-07
Agirrezabala X, Liao H, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-3j02

Lidless D386A Mm-cpn in the pre-hydrolysis ATP-bound state
by single particle reconstruction, at 8.0 A resolution, submitted on 2011-02-10
Zhang J, Ma B, DiMaio F, Douglas NR, Joachimiak L, Baker D, Frydman J, Levitt M, Chiu W

PDB-3j03

Lidless Mm-cpn in the closed state with ATP/AlFx
by single particle reconstruction, at 4.8 A resolution, submitted on 2011-02-10
Zhang J, Ma B, DiMaio F, Douglas NR, Joachimiak L, Baker D, Frydman J, Levitt M, Chiu W

PDB-4v6k

Structural insights into cognate vs. near-cognate discrimination during decoding.
by single particle reconstruction, at 8.25 A resolution, submitted on 2011-01-07
Agirrezabala X, Schreiner E, Trabuco LG, Lei J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-4v6l

Structural insights into cognate vs. near-cognate discrimination during decoding.
by single particle reconstruction, at 13.2 A resolution, submitted on 2011-01-07
Agirrezabala X, Schreiner E, Trabuco LG, Lei J, Ortiz-Meoz RF, Schulten K, Green R, Frank J

PDB-2xyy

De Novo model of Bacteriophage P22 procapsid coat protein
by single particle reconstruction, at 3.8 A resolution, submitted on 2010-11-19
Chen DH, Baker ML, Hryc CF, DiMaio F, Jakana J, Wu W, Dougherty M, Haase-Pettingell C, Schmid MF, Jiang W, Baker D, King JA, Chiu W

PDB-2xyz

De Novo model of Bacteriophage P22 virion coat protein
by single particle reconstruction, at 4.0 A resolution, submitted on 2010-11-19
Chen DH, Baker ML, Hryc CF, DiMaio F, Jakana J, Wu W, Dougherty M, Haase-Pettingell C, Schmid MF, Jiang W, Baker D, King JA, Chiu W

PDB-3izp

Conformation of EF-G during translocation
by single particle reconstruction, submitted on 2010-11-15
Li W, Trabuco LG, Schulten K, Frank J

PDB-3iz4

Modified E. coli tmRNA in the resume state with the tRNA-like domain in the ribosomal P site interacting with the SmpB
by single particle reconstruction, at 13.6 A resolution, submitted on 2010-09-21
Hashem Y, Fu J, Frank J

PDB-4v7h

Structure of the 80S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution
by single particle reconstruction, at 8.9 A resolution, submitted on 2009-09-22
Taylor DJ, Devkota B, Huang AD, Topf M, Narayanan E, Sali A, Harvey SC, Frank J

PDB-4v68

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
by single particle reconstruction, at 6.4 A resolution, submitted on 2008-12-11
Schuette JC, Spahn CMT

PDB-4v69

Ternary complex-bound E.coli 70S ribosome.
by single particle reconstruction, at 6.7 A resolution, submitted on 2008-12-11
Villa E, Sengupta J, Trabuco LG, LeBarron J, Baxter WT, Shaikh TR, Grassucci RA, Nissen P, Ehrenberg M, Schulten K, Frank J

PDB-3eq3

Model of tRNA(Trp)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
by single particle reconstruction, at 9.0 A resolution, submitted on 2008-09-30
Frank J, Li W, Agirrezabala X

PDB-3eq4

Model of tRNA(Leu)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
by single particle reconstruction, at 12.0 A resolution, submitted on 2008-09-30
Frank J, Li W, Agirrezabala X

PDB-3ep2

Model of Phe-tRNA(Phe) in the ribosomal pre-accommodated state revealed by cryo-EM
by single particle reconstruction, at 9.0 A resolution, submitted on 2008-09-29
Frank J, Li W, Agirrezabala X

PDB-3dwu

Transition-state model conformation of the switch I region fitted into the cryo-EM map of the eEF2.80S.AlF4.GDP complex
by single particle reconstruction, at 12.6 A resolution, submitted on 2008-07-23
Nissen P, Nyborg J, Kjeldgaard M

PDB-3dny

Fitting of the eEF2 crystal structure into the cryo-EM density map of the eEF2.80S.AlF4-.GDP complex
by single particle reconstruction, at 12.6 A resolution, submitted on 2008-07-03
Sengupta J, Frank J

PDB-3dg0

Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex
by single particle reconstruction, at 10.8 A resolution, submitted on 2008-06-12
Gao H, LeBarron J, Frank J

PDB-3dg2

Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex
by single particle reconstruction, at 10.0 A resolution, submitted on 2008-06-12
Gao H, LeBarron J, Frank J

PDB-3dg4

Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex
by single particle reconstruction, at 12.8 A resolution, submitted on 2008-06-12
Gao H, LeBarron J, Frank J

PDB-3dg5

Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex
by single particle reconstruction, at 15.5 A resolution, submitted on 2008-06-12
Gao H, LeBarron J, Frank J

PDB-2z9q

Transfer RNA in the hybrid P/E state
by single particle reconstruction, at 11.7 A resolution, submitted on 2007-09-25
Frank J, Li W

PDB-2rdo

50S subunit with EF-G(GDPNP) and RRF bound
by single particle reconstruction, at 9.1 A resolution, submitted on 2007-09-24
Gao N, Zavialov AV, Ehrenberg M, Frank J

PDB-2v6l

Molecular Model of a Type III Secretion System Needle
by helical reconstruction, at 16.0 A resolution, submitted on 2007-07-19
Deane JE, Roversi P, Cordes FS, Johnson S, Kenjale R, Daniell S, Booy F, Picking WL, Picking WD, Blocker AJ, Lea SM

PDB-2p8w

Fitted structure of eEF2 in the 80S:eEF2:GDPNP cryo-EM reconstruction
by single particle reconstruction, at 11.3 A resolution, submitted on 2007-03-23
Taylor DJ, Nilsson J, Merrill AR, Andersen GR, Nissen P, Frank J

PDB-2p8x

Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDPNP cryo-EM reconstruction
by single particle reconstruction, at 9.7 A resolution, submitted on 2007-03-23
Taylor DJ, Nilsson J, Merrill AR, Andersen GR, Nissen P, Frank J

PDB-2p8y

Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDP:sordarin cryo-EM reconstruction
by single particle reconstruction, at 11.7 A resolution, submitted on 2007-03-23
Taylor DJ, Nilsson J, Merrill AR, Andersen GR, Nissen P, Frank J

PDB-2p8z

Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDPNP:sordarin cryo-EM reconstruction
by single particle reconstruction, at 8.9 A resolution, submitted on 2007-03-23
Taylor DJ, Nilsson J, Merrill AR, Andersen GR, Nissen P, Frank J

PDB-2ob7

Structure of tmRNA-(SmpB)2 complex as inferred from cryo-EM
by single particle reconstruction, at 13.6 A resolution, submitted on 2006-12-18
Frank J, Felden B, Gillet R, Li W

PDB-2o0f

Docking of the modified RF3 X-ray structure into cryo-EM map of E.coli 70S ribosome bound with RF3
by single particle reconstruction, at 15.5 A resolution, submitted on 2006-11-27
Gao H, Zhou Z, Rawat U, Huang C, Bouakaz L, Wang C, Liu Y, Zavialov A, Gursky R, Sanyal S, Ehrenberg M, Frank J, Song H

PDB-4v4v

Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056
by single particle reconstruction, at 15.0 A resolution, submitted on 2006-05-09
Mitra K, Frank J

1 - 50 of 86 for "author ( j., frank )"
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