Pairwise fitting pdb-3gzu on emdb-8314 by gmfit



Pairwise fitting of target pdb-3gzu on reference emdb-8314 by gmfit(PID:4104449).

RANK[1] Corr.Coeff:0.004 [JSmol] [Molmil]
TARGET(pdb-3gzu)
display:
color:
b'VP7 RECOATED ROTAVIRUS DLP ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-3gzu)]
REFERENCE(emdb-8314)
display:
color:
Architecture of a headful DNA-packaging bacterial virus at 2.89 Angstrom resolution by electron cryo-microscopy [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.004 0.004 0.004 0.004 0.004 0.004 0.004 0.004 0.004 0.004

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8314.map.gz", and read it.
  2. Download the Target molecule "3gzu"(PDB-format) or "3gzu"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.746999,0.578054,0.328401 125.186762 center 0,0,0 model #1
    move -258.024984,-30.765651,-117.785148 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 8314)] [Download the target GMM(pdb 3gzu)] [Download gmfit result file(4104449)]