Pairwise fitting pdb-3gzu on emdb-8314 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-8314 by gmfit(PID:4104449).





RANK[1] Corr.Coeff:0.004

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

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b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-8314)

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Architecture of a headful DNA-packaging bacterial virus at 2.89 Angstrom resolution by electron cryo-microscopy [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.004
0.004
0.004
0.004
0.004
0.004
0.004
0.004
0.004
0.004







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8314.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.746999,0.578054,0.328401 125.186762 center 0,0,0 model #1
move -258.024984,-30.765651,-117.785148 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8314)]

[Download the target GMM(pdb 3gzu)]

[Download gmfit result file(4104449)]