Pairwise fitting pdb-1x18 on emdb-2203 by gmfit










Pairwise fitting of target pdb-1x18 on reference emdb-2203 by gmfit(PID:548794).





RANK[1] Corr.Coeff:0.524

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1x18)

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b'CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT   ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1x18)]







REFERENCE(emdb-2203)

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Characterization of the insertase for beta-barrel proteins of the outer mitochondrial membrane. 3-D reconstruction of the TOB complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.524
0.431
0.382
0.373
0.364
0.353
0.352
0.312
0.298
0.272







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2203.map.gz", and read it.

  2.  Download the Target molecule "1x18"(PDB-format) or
  "1x18"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.349375,-0.650624,0.674259 98.534505 center 0,0,0 model #1
move 157.894360,196.919101,172.984949 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!